RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 MAP7D3Q8IWC1 876 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 RHOT2Q8IXI1 618 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 LGI4Q8N135 537 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 AMER3Q8N944 861 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 LINC01555Q8NAE3 123 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 OR52N2Q8NGI0 321 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 C10orf90Q96M02 699 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 CHP1Q99653 195 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 ZFYVE21Q9BQ24 234 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 PLCD4Q9BRC7 762 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 ZNF670Q9BS34 389 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 FAM96AQ9H5X1 160 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 UVRAGQ9P2Y5 699 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 FKBPLQ9UIM3 349 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 C2orf81A6NN90 581 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 BTNL10A8MVZ5 291 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 CES2O00748 559 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 CLDN4O14493 209 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 NDC80O14777 642 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 LIN7AO14910 233 aaPredicted RBP11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 FKBP9O95302 570 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 CD9P21926 228 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 TACR1P25103 407 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 PKLRP30613 574 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 ADH7P40394 386 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 EFNA3P52797 238 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 RUNX1T1Q06455 604 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 BRD3Q15059 726 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 PDK2Q15119 407 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 TCEAL1Q15170 157 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 SLC1A5Q15758 541 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 TEX44Q53QW1 395 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 ZNF662Q6ZS27 426 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 LANCL3Q6ZV70 420 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 RPS19BP1Q86WX3 136 aaKnown RBP11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 ZNF227Q86WZ6 799 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 ZC3H7AQ8IWR0 971 aaKnown RBP11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 LMNTD1Q8N9Z9 388 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 OR4K2Q8NGD2 314 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 PIP5K1AQ99755 562 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 B4GALT7Q9UBV7 327 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 HEY1Q9Y5J3 304 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 FAM215AQ9Y5M1 114 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 ARL5AQ9Y689 179 aa11.82□□□□□ -0.52
AC004540.1-204ENST00000449537 CLCA1A8K7I4 914 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 FAM47E-STBD1D6RA91 191 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 ZSCAN12O43309 604 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 PEX1O43933 1283 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 DNAJB6O75190 326 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 GOSR1O95249 250 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 XIAPP98170 497 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 ACTN3Q08043 901 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 SYT16Q17RD7 645 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 PRTGQ2VWP7 1150 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 RTL6Q6ICC9 239 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 SLC13A5Q86YT5 568 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 CLDN19Q8N6F1 224 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 NIPA2Q8N8Q9 360 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 ZFP62Q8NB50 900 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 CREB3L4Q8TEY5 395 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 RNASE6Q93091 150 aaKnown RBP11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 PIGTQ969N2 578 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 VN1R1Q9GZP7 353 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 ATG10Q9H0Y0 220 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 TRIM45Q9H8W5 580 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 ZDHHC3Q9NYG2 299 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 IP6K2Q9UHH9 426 aa11.81□□□□□ -0.52
AC004540.1-204ENST00000449537 BCKDKO14874 412 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 CYC1P08574 325 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 ITGALP20701 1170 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 TPP2P29144 1249 aaPredicted RBP11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 GJC1P36383 396 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 MAGEA1P43355 309 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 ITGA8P53708 1063 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 HADHBP55084 474 aaKnown RBP11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 PDK1Q15118 436 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 TAF1AQ15573 450 aaPredicted RBP11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 KAZNQ674X7 775 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 FBXO42Q6P3S6 717 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 LRRC8BQ6P9F7 803 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 RAD9BQ6WBX8 426 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 SNX20Q7Z614 316 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 ANKRD37Q7Z713 158 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 KIAA1328Q86T90 577 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 OR2L8Q8NGY9 312 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 SLCO2A1Q92959 643 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 FAF2Q96CS3 445 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 MRGPRX2Q96LB1 330 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 TEKT5Q96M29 485 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 YIPF4Q9BSR8 244 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 SPTLC3Q9NUV7 552 aa11.8□□□□□ -0.52
AC004540.1-204ENST00000449537 FOXD3Q9UJU5 478 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms