RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 FANK1Q8TC84 345 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 KIAA1191Q96A73 305 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 PPP3R2Q96LZ3 170 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 C3orf30Q96M34 536 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 OPALINQ96PE5 141 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLC39A8Q9C0K1 460 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 IFT46Q9NQC8 304 aa13.07□□□□□ -0.32
SYNGAP1-204ENST00000449372 CHD5Q8TDI0 1954 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SYN3O14994 580 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 ALPPP05187 535 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 RHOQP17081 205 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 CDH13P55290 713 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR4D2P58180 307 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SEMA3AQ14563 771 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SMN1Q16637 294 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPRIN3Q6ZVF9 776 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 LRRC8DQ7L1W4 858 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 KDELC2Q7Z4H8 507 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 VWA5B2Q8N398 1253 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 FCRL2Q96LA5 508 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 MRGPRX2Q96LB1 330 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 C1orf74Q96LT6 269 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 DERL2Q9GZP9 239 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 ING3Q9NXR8 418 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLC2A6Q9UGQ3 507 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 ENOPH1Q9UHY7 261 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 DNAJC15Q9Y5T4 150 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLC16A6O15403 523 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 CSF2P04141 144 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 RPLP0P05388 317 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 PROS1P07225 676 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 FDXRP22570 491 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 CCT3P49368 545 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 EMX2Q04743 252 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 BAK1Q16611 211 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 LIPIQ6XZB0 460 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 ISCA2Q86U28 154 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 NLRP8Q86W28 1048 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 FBLIM1Q8WUP2 373 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SECISBP2Q96T21 854 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 POLR1EQ9GZS1 481 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SLC6A17Q9H1V8 727 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 RNF121Q9H920 327 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 GIMAP2Q9UG22 337 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 A0A0B4J293 547 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 PEX11BO96011 259 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 EPOP01588 193 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 TNFSF8P32971 234 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 PIK3CBP42338 1070 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 PPP3CCP48454 512 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 SIM2Q14190 667 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 RCAN2Q14206 197 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 POU4F3Q15319 338 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 DEFB115Q30KQ5 88 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 AFTPHQ6ULP2 937 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPR150Q8NGU9 434 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 RNF31Q96EP0 1072 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 TRMT61AQ96FX7 289 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 WACQ9BTA9 647 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 CD274Q9NZQ7 290 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 HS3ST4Q9Y661 456 aa13.06□□□□□ -0.32
SYNGAP1-204ENST00000449372 B4DXG7 233 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 LINC00032P0C843 101 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 CD1DP15813 335 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 TTC9BQ8N6N2 239 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR8J3Q8NGG0 315 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR52K2Q8NGK3 314 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 IMP4Q96G21 291 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 STARD7Q9NQZ5 370 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 TLR6Q9Y2C9 796 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 A0A1W2PQ09 198 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 SELPP16109 830 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 TSPAN8P19075 237 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 HLA-DMAP28067 261 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 CD86P42081 329 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 CACHD1Q5VU97 1274 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 CYHR1Q6ZMK1 362 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 KLHL6Q8WZ60 621 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 PDLIM5Q96HC4 596 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 DCLRE1CQ96SD1 692 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 GPR62Q9BZJ7 368 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 ERN1O75460 977 aaKnown RBP13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 OR5F1O95221 314 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 S1PR4O95977 384 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 CSNK2BP67870 215 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 OLR1P78380 273 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 BAMBIQ13145 260 aa13.05□□□□□ -0.32
SYNGAP1-204ENST00000449372 ZMAT1Q5H9K5 638 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms