RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PCDH1Q08174 1060 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 CYP4F3Q08477 520 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 LAPTM5Q13571 262 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 ABRAXAS2Q15018 415 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 RBBP5Q15291 538 aaKnown RBP14.05□□□□□ -0.16
TNF-208ENST00000449264 UGT3A2Q3SY77 523 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 FRG2Q64ET8 278 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 RNF175Q8N4F7 328 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 ZNF473Q8WTR7 871 aaKnown RBP14.05□□□□□ -0.16
TNF-208ENST00000449264 SELENOMQ8WWX9 145 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 CCT6BQ92526 530 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 C19orf60Q96EN9 201 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 FRG2BQ96QU4 278 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 MAP3K3Q99759 626 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 PLCD4Q9BRC7 762 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 TMEM120AQ9BXJ8 343 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 TUBB1Q9H4B7 451 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 TMEM184CQ9NVA4 438 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 PSD3Q9NYI0 1048 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 KLHL14Q9P2G3 628 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 ZNF490Q9ULM2 529 aaPredicted RBP14.05□□□□□ -0.16
TNF-208ENST00000449264 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 FAM186AA6NE01 2351 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 GOLGA8QA0A0J9YX86 632 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 GOLGA8OA6NCC3 632 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 TRPC5OSA6NMA1 111 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 GOLGA8NF8WBI6 632 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 H0YIV9 168 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 KIF1CO43896 1103 aaKnown RBP14.04□□□□□ -0.16
TNF-208ENST00000449264 SNX3O60493 162 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 PRAMEF10O60809 474 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ULK1O75385 1050 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 RASSF9O75901 435 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 PDYNP01213 254 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 LINC00032P0C843 101 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ST6GAL1P15907 406 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 CXCR2P25025 360 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 CD1CP29017 333 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 CYP4F2P78329 520 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 CCL7P80098 99 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 E2F2Q14209 437 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 SLC9B1Q4ZJI4 515 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 SNAP47Q5SQN1 464 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 FIGLAQ6QHK4 219 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 TMIGD1Q6UXZ0 262 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.16
TNF-208ENST00000449264 OR7G3Q8NG95 312 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 REPS1Q96D71 796 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ZDHHC12Q96GR4 267 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 MTERF1Q99551 399 aaKnown RBP14.04□□□□□ -0.16
TNF-208ENST00000449264 EBF4Q9BQW3 602 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 NUDT22Q9BRQ3 303 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 TMEM9Q9P0T7 183 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ATXN7L1Q9ULK2 861 aaPredicted RBP14.04□□□□□ -0.16
TNF-208ENST00000449264 SNX7Q9UNH6 387 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 PCDHGA11Q9Y5H2 935 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ATP6AP2A0A1C7CYW4 349 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ZNF195O14628 629 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 OR1F1O43749 312 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ATP6AP2O75787 350 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 FKBP9O95302 570 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ALOX15P16050 662 aaPredicted RBP14.04□□□□□ -0.16
TNF-208ENST00000449264 CKMT2P17540 419 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 HRH2P25021 359 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 EPHA3P29320 983 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ARFIP2P53365 341 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 CFHR1Q03591 330 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 FCRL6Q6DN72 434 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 ZNF425Q6IV72 752 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 PAQR7Q86WK9 346 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 PLXDC1Q8IUK5 500 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 OR4K1Q8NGD4 311 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 UBE2E3Q969T4 207 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 SIKE1Q9BRV8 207 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 SEMA6CQ9H3T2 930 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 WDR55Q9H6Y2 383 aaPredicted RBP14.04□□□□□ -0.16
TNF-208ENST00000449264 KCNK13Q9HB14 408 aa14.04□□□□□ -0.16
TNF-208ENST00000449264 A0A1W2PQM1 296 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 TLCD2A6NGC4 264 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 SLC9B1P1A6NJY1 282 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 PROB1E7EW31 1015 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 SH3BGRLO75368 114 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 STATHP02808 62 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 BCL6P41182 706 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 NAA25Q14CX7 972 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 IMPG1Q17R60 797 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 CCDC157Q569K6 752 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 GKAP1Q5VSY0 366 aaPredicted RBP14.03□□□□□ -0.16
TNF-208ENST00000449264 NXNQ6DKJ4 435 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 EPGNQ6UW88 154 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 ASCL5Q7RTU5 278 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 LAS2Q8IYD9 372 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 TBC1D19Q8N5T2 526 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 C19orf47Q8N9M1 422 aaKnown RBP14.03□□□□□ -0.16
TNF-208ENST00000449264 ANKRD53Q8N9V6 530 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 HUS1BQ8NHY5 278 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 BAHD1Q8TBE0 780 aaPredicted RBP14.03□□□□□ -0.16
TNF-208ENST00000449264 WDR20Q8TBZ3 569 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 C10orf82Q8WW14 230 aa14.03□□□□□ -0.16
TNF-208ENST00000449264 USP7Q93009 1102 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms