RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 RAD9BQ6WBX8 426 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 IRF2BP2Q7Z5L9 587 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DTD2Q96FN9 168 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SFXN2Q96NB2 322 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 NDNQ99608 321 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 MANSC1Q9H8J5 431 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EIF2B3Q9NR50 452 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM96BQ9Y3D0 163 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 FOXO6A8MYZ6 492 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ANHXE9PGG2 379 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DNALI1O14645 258 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 NDUFS4O43181 175 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RGS14O43566 566 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EPN2O95208 641 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 OTCP00480 354 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RNH1P13489 461 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EPORP19235 508 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCNA2P20248 432 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSRP1P21291 193 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCNK10P57789 538 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PFKFB4Q16877 469 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 GRAMD1BQ3KR37 738 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EMBQ6PCB8 327 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 NUP54Q7Z3B4 507 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMC8Q8IU68 726 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM132CQ8N3T6 1108 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZFPM2Q8WW38 1151 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RND1Q92730 232 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SH3GL2Q99962 352 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TBC1D10AQ9BXI6 508 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRIM8Q9BZR9 551 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ALG9Q9H6U8 611 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SEMA3GQ9NS98 782 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EXD2Q9NVH0 621 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CORO1CQ9ULV4 474 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 MPDZO75970 2070 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A087X1B8 175 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 E2F6O75461 281 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 GIMD1P0DJR0 217 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ATF4P18848 351 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TFEBP19484 476 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCGF2P35227 344 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CRADDP78560 199 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLIN5Q00G26 463 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 KLHL17Q6TDP4 642 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 HSDL2Q6YN16 418 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM26Q6ZUK4 368 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF276Q8N554 614 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM171Q8WVE6 324 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CKAP2Q8WWK9 683 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CENPIQ92674 756 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLEKHG4BQ96PX9 1271 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TIMM29Q9BSF4 260 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DPH1Q9BZG8 443 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 Q9H521 79 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 MTF2Q9Y483 593 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A1W2PPW3 197 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 LMO7DNF2Z398 122 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ERI3O43414 337 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 IFNA14P01570 189 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 UNGP13051 313 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYP4B1P13584 511 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 GRIA3P42263 894 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 IRF9Q00978 393 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DYNC1I2Q13409 638 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZKSCAN8Q15776 578 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRSS36Q5K4E3 855 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RINLQ6ZS11 566 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 BPHLQ86WA6 291 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF527Q8NB42 609 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR13C4Q8NGS5 318 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 OSBPL10Q9BXB5 764 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM168Q9H0V1 697 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 MED4Q9NPJ6 270 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EMC9Q9Y3B6 208 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PHGDHO43175 533 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DNAJB6O75190 326 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PIAS2O75928 621 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 S1PR4O95977 384 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ATXN1LP0C7T5 689 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 VASPP50552 380 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 MLLT10P55197 1068 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRAF2Q12933 501 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RPA4Q13156 261 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 DOC2AQ14183 400 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRIM69Q86WT6 500 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF454Q8N9F8 522 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 FIZ1Q96SL8 496 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RBBP8Q99708 897 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 TDRD1Q9BXT4 1180 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 BEX2Q9BXY8 128 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAD21L1Q9H4I0 556 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRTFDC1Q9NRG1 225 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 EIF3KQ9UBQ5 218 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCDHGA11Q9Y5H2 935 aa5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPIN1Q9Y657 262 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLSCR5A0PG75 271 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 GABRR3A8MPY1 467 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 GLB1P16278 677 aa5.44□□□□□ -1.54
CDC42BPA-209ENST00000448940 GABRB2P47870 512 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms