RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 REXO1L1PQ8IX06 675 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 HORMAD2Q8N7B1 307 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 AMER3Q8N944 861 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 FBXO15Q8NCQ5 510 aaPredicted RBP12.6□□□□□ -0.39
HMGB3-204ENST00000448905 ASB11Q8WXH4 323 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 IMMP1LQ96LU5 166 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 FAM129AQ9BZQ8 928 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 TMEM184CQ9NVA4 438 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 PCYOX1Q9UHG3 505 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 SOX13Q9UN79 622 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 CROCCQ5TZA2 2017 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
HMGB3-204ENST00000448905 KRT87PA6NCN2 255 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 E7ENX8 843 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 GOLGA8TH3BQL2 631 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 H7BY64 318 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 FFAR3O14843 346 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 GPR42O15529 346 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 FOXS1O43638 330 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 NRP2O60462 931 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 SLC16A8O95907 504 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ITGAMP11215 1152 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ENO3P13929 434 aaPredicted RBP12.59□□□□□ -0.39
HMGB3-204ENST00000448905 PRF1P14222 555 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 HTR1EP28566 365 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 CA7P43166 264 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 AGTR2P50052 363 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 TAP2Q03519 686 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ACTN3Q08043 901 aaPredicted RBP12.59□□□□□ -0.39
HMGB3-204ENST00000448905 PCOLCEQ15113 449 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 BTBD16Q32M84 506 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 MINDY4Q4G0A6 757 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ZNF766Q5HY98 468 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.59□□□□□ -0.39
HMGB3-204ENST00000448905 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ZNF425Q6IV72 752 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 BNC2Q6ZN30 1099 aaPredicted RBP12.59□□□□□ -0.39
HMGB3-204ENST00000448905 GDF7Q7Z4P5 450 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 CILP2Q8IUL8 1156 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ZNF480Q8WV37 535 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 ITLN2Q8WWU7 325 aaPredicted RBP12.59□□□□□ -0.39
HMGB3-204ENST00000448905 THAP11Q96EK4 314 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 PRAP1Q96NZ9 151 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 PCBD2Q9H0N5 130 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 SYBUQ9NX95 663 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 PCDHGB6Q9Y5F9 930 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 DOPEY1Q5JWR5 2465 aa12.59□□□□□ -0.39
HMGB3-204ENST00000448905 KCNE1BA0A087WTH5 132 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 IGKV1-8A0A0C4DH67 115 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 SDR42E2A6NKP2 422 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 NSA2O95478 260 aaKnown RBP12.58□□□□□ -0.4
HMGB3-204ENST00000448905 MPC1LP0DKB6 136 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 CD46P15529 392 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 TPSB2P20231 275 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 AGAP20933 346 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 IL10P22301 178 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 GRK3P35626 688 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 RPS15AP62244 130 aaKnown RBP12.58□□□□□ -0.4
HMGB3-204ENST00000448905 TPSAB1Q15661 275 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 EXT1Q16394 746 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 MEP1AQ16819 746 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 ZNF630Q2M218 657 aaPredicted RBP12.58□□□□□ -0.4
HMGB3-204ENST00000448905 ACER2Q5QJU3 275 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 PLAG1Q6DJT9 500 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 ZC3H7AQ8IWR0 971 aaKnown RBP12.58□□□□□ -0.4
HMGB3-204ENST00000448905 PALM2Q8IXS6 379 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 FAM98AQ8NCA5 519 aaKnown RBP12.58□□□□□ -0.4
HMGB3-204ENST00000448905 CAMKVQ8NCB2 501 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 PPFIBP2Q8ND30 876 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 OR9A4Q8NGU2 314 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 CCDC120Q96HB5 630 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 UTP23Q9BRU9 249 aaKnown RBP12.58□□□□□ -0.4
HMGB3-204ENST00000448905 KCNK13Q9HB14 408 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 COMMD10Q9Y6G5 202 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
HMGB3-204ENST00000448905 A0A0U1RQJ8 604 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 GFYI3L273 518 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 CDK2AP1O14519 115 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 HAT1O14929 419 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 KIF5CO60282 957 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 SLC19A2O60779 497 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 SEC24DO94855 1032 aaPredicted RBP12.57□□□□□ -0.4
HMGB3-204ENST00000448905 FGGP02679 453 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 MST1P26927 711 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 ARNTP27540 789 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 EEF1DP29692 281 aaKnown RBP12.57□□□□□ -0.4
HMGB3-204ENST00000448905 BCL6P41182 706 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 CLCN7P51798 805 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 MAT1AQ00266 395 aaKnown RBP12.57□□□□□ -0.4
HMGB3-204ENST00000448905 DHX34Q14147 1143 aaKnown RBP12.57□□□□□ -0.4
HMGB3-204ENST00000448905 SYT16Q17RD7 645 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 LRRC8EQ6NSJ5 796 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 UGT3A1Q6NUS8 523 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 CENPUQ71F23 418 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 TMEM139Q8IV31 216 aa12.57□□□□□ -0.4
HMGB3-204ENST00000448905 PRELID2Q8N945 189 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms