RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 B3GALT4O96024 378 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 NCK1P16333 377 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 PTPN6P29350 595 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 TPMTP51580 245 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 KIAA1024LP59773 190 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
LMNA-208ENST00000448611 SMAD2Q15796 467 aaKnown RBP17.05■□□□□ 0.32
LMNA-208ENST00000448611 DPY19L1Q2PZI1 675 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 AASDHQ4L235 1098 aaPredicted RBP17.05■□□□□ 0.32
LMNA-208ENST00000448611 GALNT18Q6P9A2 607 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 ZNF740Q8NDX6 193 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 ADCY4Q8NFM4 1077 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 FAM110BQ8TC76 370 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 LRTOMTQ8WZ04 291 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 ITCHQ96J02 903 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 SIRT5Q9NXA8 310 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.05■□□□□ 0.32
LMNA-208ENST00000448611 MOSPD1Q9UJG1 213 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 GPSM3Q9Y4H4 160 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 DTNAQ9Y4J8 743 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 PCDHB14Q9Y5E9 798 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 A0A1W2PPV9 198 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 TCRBV21S2A2A0A5A6 115 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 GABRG2P18507 467 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 PIK3CBP42338 1070 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 KIR3DL1P43629 444 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 HNRNPFP52597 415 aaKnown RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 CLDN2P57739 230 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 CYP4F3Q08477 520 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 OR4F3Q6IEY1 312 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 ANKRD46Q86W74 232 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 PROSER1Q86XN7 944 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 ADGRG5Q8IZF4 528 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 DENND6BQ8NEG7 585 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 GPR156Q8NFN8 814 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 OR7A2PQ8NGA2 310 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 SMPDL3AQ92484 453 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 UBE2E3Q969T4 207 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 FERD3LQ96RJ6 166 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 SH3GL1Q99961 368 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 INPP5KQ9BT40 448 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 EFHD1Q9BUP0 239 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 ACAT2Q9BWD1 397 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 PHF7Q9BWX1 381 aaPredicted RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 RPF2Q9H7B2 306 aaKnown RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 TAC3Q9UHF0 121 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 PCM1Q15154 2024 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 SCN2BO60939 215 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 ANXA4P09525 319 aaPredicted RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 CD72P21854 359 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 IDSP22304 550 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 TIA1P31483 386 aaKnown RBP eCLIP17.04■□□□□ 0.322e-13■□□□□ 9.9
LMNA-208ENST00000448611 SOX11P35716 441 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 WNT3P56703 355 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 CTBSQ01459 385 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 SRSF11Q05519 484 aaKnown RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 CLCA4Q14CN2 919 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 TMIGD1Q6UXZ0 262 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 C17orf64Q86WR6 236 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 LINC01555Q8NAE3 123 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 CATSPER1Q8NEC5 780 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 MSANTD3Q96H12 275 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 THUMPD3Q9BV44 507 aaKnown RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 REXO4Q9GZR2 422 aaKnown RBP17.04■□□□□ 0.32
LMNA-208ENST00000448611 PELI2Q9HAT8 420 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 WASH6PQ9NQA3 447 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 MAGEL2Q9UJ55 1249 aa17.04■□□□□ 0.32
LMNA-208ENST00000448611 PRSS38A1L453 326 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 GPIP06744 558 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 IL9P15248 144 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 PSMA4P25789 261 aaKnown RBP17.03■□□□□ 0.32
LMNA-208ENST00000448611 OXTRP30559 389 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 CDKN2CP42773 168 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 ASMTP46597 345 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 ANO7Q6IWH7 933 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 HMBOX1Q6NT76 420 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 ARMCX6Q7L4S7 300 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 VN1R5Q7Z5H4 357 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 KRT78Q8N1N4 520 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 DTWD1Q8N5C7 304 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 OR8J2Q8NGG1 315 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 CCDC115Q96NT0 180 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 CPPED1Q9BRF8 314 aaPredicted RBP17.03■□□□□ 0.32
LMNA-208ENST00000448611 PCBD2Q9H0N5 130 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 IMP3Q9NV31 184 aaKnown RBP17.03■□□□□ 0.32
LMNA-208ENST00000448611 CA5BQ9Y2D0 317 aa17.03■□□□□ 0.32
LMNA-208ENST00000448611 FPGTO14772 594 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 SCAMP2O15127 329 aaKnown RBP17.02■□□□□ 0.32
LMNA-208ENST00000448611 PCDH7O60245 1069 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 TIPRLO75663 272 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 TGFB1P01137 390 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 COX7A2P14406 83 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 GGT1P19440 569 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 PSMB5P28074 263 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 NFATC4Q14934 902 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 CYP51A1Q16850 503 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 UAP1L1Q3KQV9 507 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 PUS10Q3MIT2 529 aaKnown RBP17.02■□□□□ 0.32
LMNA-208ENST00000448611 TMEM31Q5JXX7 168 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms