RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FAM196AQ6ZSG2 479 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 NRROSQ86YC3 692 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SPPL2CQ8IUH8 684 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ABRAQ8N0Z2 381 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 KCT2Q8NC54 265 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 OR4L1Q8NH43 312 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 OR5K1Q8NHB7 308 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ETNK2Q9NVF9 386 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.73□□□□□ -1.013e-7■■■■□ 22.8
NIPBL-202ENST00000448238 LRRC42Q9Y546 428 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ARHGEF15O94989 841 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 MAKP20794 623 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 KITLGP21583 273 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CD86P42081 329 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SLC35F1Q5T1Q4 408 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PRAMEF13Q5VWM6 474 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 FOXR1Q6PIV2 292 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 VSTM1Q6UX27 236 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CERS6Q6ZMG9 384 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CLEC17AQ6ZS10 378 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CARM1Q86X55 608 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 C7orf57Q8NEG2 295 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ACBD6Q9BR61 282 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 MXRA8Q9BRK3 442 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TIGARQ9NQ88 270 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TAS2R9Q9NYW1 312 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ABRACLQ9P1F3 81 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ALPPL2P10696 532 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CRKLP46109 303 aaKnown RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 BST1Q10588 318 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 CNPY1Q3B7I2 92 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PLEKHG7Q6ZR37 379 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 GALNT10Q86SR1 603 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PDSS2Q86YH6 399 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM209Q96SK2 561 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SLC6A7Q99884 636 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 UNC93B1Q9H1C4 597 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 SLA2Q9H6Q3 261 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ANTXR1Q9H6X2 564 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 ASB6Q9NWX5 421 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 YTHDF2Q9Y5A9 579 aaKnown RBP8.73□□□□□ -1.01
NIPBL-202ENST00000448238 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
NIPBL-202ENST00000448238 C9J4A7 227 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SLC7A4O43246 635 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 STK16O75716 305 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 INAVAQ3KP66 663 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM205Q6UW68 189 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SLC47A2Q86VL8 602 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 PACRGLQ8N7B6 248 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ANKRD52Q8NB46 1076 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 GPRC5AQ8NFJ5 357 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 OR13C9Q8NGT0 318 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SORCS1Q8WY21 1168 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 NLGN3Q9NZ94 848 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 DNAJB9Q9UBS3 223 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 RNF215Q9Y6U7 377 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 INTS1Q8N201 2190 aaKnown RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 PRKYO43930 277 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 GLI1P08151 1106 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MED27Q6P2C8 311 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MON1BQ7L1V2 547 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 IQCHQ86VS3 1027 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MARCH9Q86YJ5 346 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TXNDC15Q96J42 360 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MKS1Q9NXB0 559 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TEX14Q8IWB6 1497 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 OR2AG2A6NM03 316 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 PP2D1A8MPX8 630 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TGFB3P10600 412 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 FRKP42685 505 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 PITPNBP48739 271 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MPP1Q00013 466 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMCO2Q7Z6W1 182 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM125Q96AQ2 219 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 RADILQ96JH8 1075 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MAP3K14Q99558 947 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 DENND4BO75064 1496 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 A0A087WUU8 490 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF850A8MQ14 1090 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM150CB9EJG8 249 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 H7C1Q1 480 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 LATO43561 262 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 KNG1P01042 644 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 LEPRP48357 1165 aaKnown RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MADCAM1Q13477 382 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ZC3H14Q6PJT7 736 aaKnown RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 RALGPS2Q86X27 583 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 GID4Q8IVV7 300 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 DNAJC22Q8N4W6 341 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TRAM1L1Q8N609 369 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 OR56A1Q8NGH5 318 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 NSMAFQ92636 917 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MRPL45Q9BRJ2 306 aaKnown RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 B3GALT2O43825 422 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ADH1CP00326 375 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 IL13P35225 146 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 KCNJ5P48544 419 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms