RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
SGCE-206ENST00000445866 FFAR3O14843 346 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 GPR42O15529 346 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 CTSVO60911 334 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 SNUPNO95149 360 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 KCNK5O95279 499 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 MT-CO3P00414 261 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 CAPN1P07384 714 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 THRAP10827 490 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 SERPINB3P29508 390 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 SH2D4BQ5SQS7 431 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 GRHL2Q6ISB3 625 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 MED27Q6P2C8 311 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 B3GNT8Q7Z7M8 397 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 KMT5CQ86Y97 462 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 MCATQ8IVS2 390 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 CLYBLQ8N0X4 340 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 UBE2E3Q969T4 207 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 SPNS1Q9H2V7 528 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 SLCO1B3Q9NPD5 702 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 TRPS1Q9UHF7 1281 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 FIS1Q9Y3D6 152 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 PCDHGA11Q9Y5H2 935 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 FAM186AA6NE01 2351 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 GOLGA4Q13439 2230 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 A0A0J9YVX5 310 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 TRBC2A0A5B9 178 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 DCDC2BA2VCK2 349 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 AZIN1O14977 448 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 ENO1P06733 434 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 FGF4P08620 206 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 VIMP08670 466 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 EZRP15311 586 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 NELFEP18615 380 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 HMOX2P30519 316 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 MLLT3P42568 568 aaPredicted RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 INHBCP55103 352 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 CLDN6P56747 220 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 RELAQ04206 551 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 TRA2AQ13595 282 aaKnown RBP eCLIP16.69■□□□□ 0.26
SGCE-206ENST00000445866 SGO1Q5FBB7 561 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 ZC3H12BQ5HYM0 836 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 TMTC4Q5T4D3 741 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 RGS9BPQ6ZS82 235 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 DNAJC22Q8N4W6 341 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 N4BP2L2Q92802 583 aaPredicted RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 PRR11Q96HE9 360 aaPredicted RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 SLC41A2Q96JW4 573 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 FCRL4Q96PJ5 515 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 KCNA7Q96RP8 456 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 SORT1Q99523 831 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 PITHD1Q9GZP4 211 aaPredicted RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 ZNF768Q9H5H4 540 aaKnown RBP16.69■□□□□ 0.26
SGCE-206ENST00000445866 PNPOQ9NVS9 261 aa16.69■□□□□ 0.26
SGCE-206ENST00000445866 ASCC3Q8N3C0 2202 aaKnown RBP16.68■□□□□ 0.26
SGCE-206ENST00000445866 ANKRD34CP0C6C1 535 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 UROSP10746 265 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 PCNAP12004 261 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 CSTF2P33240 577 aaKnown RBP eCLIP16.68■□□□□ 0.26
SGCE-206ENST00000445866 RPL14P50914 215 aaKnown RBP16.68■□□□□ 0.26
SGCE-206ENST00000445866 NEK2P51955 445 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 FOXA1P55317 472 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 RPS15AP62244 130 aaKnown RBP16.68■□□□□ 0.26
SGCE-206ENST00000445866 REEP5Q00765 189 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 OCRLQ01968 901 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 CYP4F3Q08477 520 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 IFT88Q13099 833 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 E2F2Q14209 437 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 KCNAB1Q14722 419 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 CLEC6AQ6EIG7 209 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 FAM47EQ6ZV65 393 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 CRLF3Q8IUI8 442 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 D2HGDHQ8N465 521 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 ZNF781Q8N8C0 355 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 OR7G3Q8NG95 312 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 ZFYVE21Q9BQ24 234 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 RTKNQ9BST9 563 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 ELOVL6Q9H5J4 265 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 NT5DC2Q9H857 520 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 PILRAQ9UKJ1 303 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 SNX6Q9UNH7 406 aa16.68■□□□□ 0.26
SGCE-206ENST00000445866 KCNE1BA0A087WTH5 132 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 ANKDD1BA6NHY2 528 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 H0YIV9 168 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 TMX2-CTNND1H3BSU7 103 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 HGSO14964 777 aaPredicted RBP16.67■□□□□ 0.26
SGCE-206ENST00000445866 ULK1O75385 1050 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 KRT6AP02538 564 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 KRT6BP04259 564 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 SERPIND1P05546 499 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 BCL6P41182 706 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 KRT6CP48668 564 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 GGTA1PQ4G0N0 100 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 CDCP2Q5VXM1 449 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 FAM219BQ5XKK7 198 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 FRG2Q64ET8 278 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 REPS1Q96D71 796 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 FRG2BQ96QU4 278 aa16.67■□□□□ 0.26
SGCE-206ENST00000445866 SLC29A3Q9BZD2 475 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms