RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 OR4N4Q8N0Y3 316 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 RBMXL3Q8N7X1 1067 aaKnown RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 EIF1ADQ8N9N8 165 aaKnown RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 GALNT11Q8NCW6 608 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 FER1L6-AS2Q96M78 137 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 ZNF285Q96NJ3 590 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 SMAD5Q99717 465 aaKnown RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 TRIM54Q9BYV2 358 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 ATG10Q9H0Y0 220 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 ARL15Q9NXU5 204 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 MTRF1LQ9UGC7 380 aaKnown RBP13.37□□□□□ -0.27
TREX1-202ENST00000444177 PCSK5Q92824 1860 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 ICE1Q9Y2F5 2266 aa13.37□□□□□ -0.27
TREX1-202ENST00000444177 NOTCH2Q04721 2471 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 FITM1A5D6W6 292 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 NPEPPSL1A6NEC2 478 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 FAM159BA6NKW6 160 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 HAT1O14929 419 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 GUCA1CO95843 209 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 ONECUT2O95948 504 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 IGHEP01854 428 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 ENO2P09104 434 aaPredicted RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 EZRP15311 586 aaKnown RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 ITGAXP20702 1163 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 STX2P32856 288 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 GP5P40197 560 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 AP1S2P56377 157 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 ILF2Q12905 390 aaKnown RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 NAE1Q13564 534 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 INPP5JQ15735 1006 aaPredicted RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 YOD1Q5VVQ6 348 aaPredicted RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 ZNF425Q6IV72 752 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 OVCH1Q7RTY7 1134 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 PPP1R32Q7Z5V6 425 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 PLD3Q8IV08 490 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 NKAPQ8N5F7 415 aaKnown RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 CSNK1A1LQ8N752 337 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 Q8NA96 180 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 CLEC1AQ8NC01 280 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 RERGQ96A58 199 aaPredicted RBP13.36□□□□□ -0.27
TREX1-202ENST00000444177 RBBP8Q99708 897 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 CPNE1Q99829 537 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 GPAMQ9HCL2 828 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 SLAMF7Q9NQ25 335 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 ENAMQ9NRM1 1142 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 LUZP4Q9P127 313 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 C5AR2Q9P296 337 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 SHANK1Q9Y566 2161 aa13.36□□□□□ -0.27
TREX1-202ENST00000444177 HYKKA2RU49 373 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 H0YGG7 62 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 H7BY64 318 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 MASP2O00187 686 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 ALBP02768 609 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 PIM1P11309 404 aaPredicted RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 GNLYP22749 145 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 CCND1P24385 295 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 UQCRFS1P47985 274 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 ARF3P61204 181 aaPredicted RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 USP10Q14694 798 aaKnown RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 HKDC1Q2TB90 917 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 KBTBD12Q3ZCT8 623 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 VWA5B1Q5TIE3 1220 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 SLC6A19Q695T7 634 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 CAPN13Q6MZZ7 669 aaPredicted RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 FBXO42Q6P3S6 717 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 FRA10AC1Q70Z53 315 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 CEP97Q8IW35 865 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 GALNT16Q8N428 558 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 DTWD1Q8N5C7 304 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 PNPLA2Q96AD5 504 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 TSPAN17Q96FV3 270 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 PDLIM5Q96HC4 596 aaKnown RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 CABS1Q96KC9 395 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 PRAP1Q96NZ9 151 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 FMO2Q99518 471 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 MCMBPQ9BTE3 642 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 SYNPO2LQ9H987 977 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 CAB39LQ9H9S4 337 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 POPDC3Q9HBV1 291 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 LRRC4CQ9HCJ2 640 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 SH2B3Q9UQQ2 575 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 RUVBL1Q9Y265 456 aaKnown RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 MTO1Q9Y2Z2 717 aaKnown RBP13.35□□□□□ -0.27
TREX1-202ENST00000444177 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 HIVEP3Q5T1R4 2406 aa13.35□□□□□ -0.27
TREX1-202ENST00000444177 CDC7O00311 574 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 PHGDHO43175 533 aaKnown RBP13.34□□□□□ -0.27
TREX1-202ENST00000444177 SLU7O95391 586 aaKnown RBP13.34□□□□□ -0.27
TREX1-202ENST00000444177 MED26O95402 600 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 ECHS1P30084 290 aa13.34□□□□□ -0.27
TREX1-202ENST00000444177 OR1D4P47884 311 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms