RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 SOX7Q9BT81 388 aa6.59□□□□□ -1.35
SSXP3-201ENST00000442971 GATA5Q9BWX5 397 aaPredicted RBP6.59□□□□□ -1.35
SSXP3-201ENST00000442971 SPATA16Q9BXB7 569 aa6.59□□□□□ -1.35
SSXP3-201ENST00000442971 PRR14LQ5THK1 2151 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 FITM1A5D6W6 292 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 PDE5AO76074 875 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 CLDN9O95484 217 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 RELBQ01201 579 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 KIF5AQ12840 1032 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 SLC25A52Q3SY17 297 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 FOXD4L5Q5VV16 416 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 C11orf57Q6ZUT1 292 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 INTS8Q75QN2 995 aaKnown RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 CILP2Q8IUL8 1156 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 BEND7Q8N7W2 519 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 LILRB1Q8NHL6 650 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 FOXD4L4Q8WXT5 416 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 C11orf24Q96F05 449 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 PLPPR2Q96GM1 343 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 ADAD1Q96M93 576 aaKnown RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 CPXM1Q96SM3 734 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 ANP32EQ9BTT0 268 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 SFXN3Q9BWM7 321 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 SUCNR1Q9BXA5 334 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 MAGEB5Q9BZ81 275 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 TGIF2Q9GZN2 237 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 PIGMQ9H3S5 423 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 TFB2MQ9H5Q4 396 aaKnown RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 XKR8Q9H6D3 395 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 TIMMDC1Q9NPL8 285 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 DDX28Q9NUL7 540 aaKnown RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 C19orf25Q9UFG5 118 aaPredicted RBP6.58□□□□□ -1.36
SSXP3-201ENST00000442971 B3GALT5Q9Y2C3 310 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 DUSP10Q9Y6W6 482 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 DNAH3Q8TD57 4116 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 HERC1Q15751 4861 aa6.58□□□□□ -1.36
SSXP3-201ENST00000442971 A0A0J9YYE9 177 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 FRG2CA6NGY1 282 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 CD8B2A6NJW9 211 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 FCHO1O14526 889 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 CD8AP01732 235 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 TRBC1P01850 177 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 NR3C1P04150 777 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 PDHA1P08559 390 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 KRT13P13646 458 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 TBXAS1P24557 533 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 CCKARP32238 428 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 UGT2B10P36537 528 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 FLT3P36888 993 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 CD79BP40259 229 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 MXI1P50539 228 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 RENBPP51606 427 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 IRX1P78414 480 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 SLC6A3Q01959 620 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 GTF2H3Q13889 308 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 PDK1Q15118 436 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 ERICH6BQ5W0A0 696 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 GALNT12Q8IXK2 581 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 UMODL1-AS1Q8N2C9 162 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 ZNF397Q8NF99 534 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 FAM110DQ8TAY7 271 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 FAM111AQ96PZ2 611 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 PSKH2Q96QS6 385 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 CYTH2Q99418 400 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 TRAF4Q9BUZ4 470 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 RAB11FIP5Q9BXF6 653 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 CDC42EP4Q9H3Q1 356 aaKnown RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 IL1RL2Q9HB29 575 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 MKKSQ9NPJ1 570 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 ENAMQ9NRM1 1142 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 AURKAIP1Q9NWT8 199 aaPredicted RBP6.57□□□□□ -1.36
SSXP3-201ENST00000442971 SPHK1Q9NYA1 384 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 PKD2L2Q9NZM6 624 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 DNPEPQ9ULA0 475 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 USP22Q9UPT9 525 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 HEBP2Q9Y5Z4 205 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 SCINQ9Y6U3 715 aa6.57□□□□□ -1.36
SSXP3-201ENST00000442971 A0A0G2JMM0 328 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 A0A1W2PPB8 328 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 A0A1W2PRS3 328 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 RGSL1A5PLK6 1076 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 SLC22A31A6NKX4 558 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 KIR3DP1A8MWS1 328 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 CTSVO60911 334 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 TSPAN15O95858 294 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 FTCDO95954 541 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 SLC35G4P0C7Q5 338 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 EPHA1P21709 976 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 PCMT1P22061 227 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 GPC1P35052 558 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 PTPN9P43378 593 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 TMEM115Q12893 351 aaPredicted RBP6.56□□□□□ -1.36
SSXP3-201ENST00000442971 RFTN1Q14699 578 aaPredicted RBP6.56□□□□□ -1.36
SSXP3-201ENST00000442971 NFKBIBQ15653 356 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 MEA1Q16626 185 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 PGGHGQ32M88 737 aa6.56□□□□□ -1.36
SSXP3-201ENST00000442971 TCERG1LQ5VWI1 586 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms