RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PSMF1Q92530 271 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 PCYOX1Q9UHG3 505 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 MKL2Q9ULH7 1088 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
PTPRE-203ENST00000442830 CRYL1Q9Y2S2 319 aa13.1□□□□□ -0.31
PTPRE-203ENST00000442830 FAM237BA0A1B0GVD1 139 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 SMAPO00193 183 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 PRAMEF2O60811 474 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 NSA2O95478 260 aaKnown RBP13.09□□□□□ -0.31
PTPRE-203ENST00000442830 SLC16A8O95907 504 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 IL10P22301 178 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 CCND1P24385 295 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 MAGEA6P43360 314 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 SKP1P63208 163 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 PTK6Q13882 451 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 PCOLCEQ15113 449 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
PTPRE-203ENST00000442830 EXT1Q16394 746 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 ACSBG2Q5FVE4 666 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 THEMIS2Q5TEJ8 643 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
PTPRE-203ENST00000442830 CASC4Q6P4E1 433 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 ZNF662Q6ZS27 426 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 ADCK2Q7Z695 626 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 PCGF5Q86SE9 256 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 REXO1L1PQ8IX06 675 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 SIRT6Q8N6T7 355 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 ZNF354BQ96LW1 612 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 PKP4Q99569 1192 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 XAB2Q9HCS7 855 aaKnown RBP13.09□□□□□ -0.31
PTPRE-203ENST00000442830 TMEM184CQ9NVA4 438 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 SEC14L3Q9UDX4 400 aa13.09□□□□□ -0.31
PTPRE-203ENST00000442830 KCNE1BA0A087WTH5 132 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 IGKV1-8A0A0C4DH67 115 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 E7ENX8 843 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 WDPCPO95876 746 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 FGGP02679 453 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 AGAP20933 346 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 GRK3P35626 688 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 SKIV2L2P42285 1042 aaKnown RBP13.08□□□□□ -0.32
PTPRE-203ENST00000442830 CLCN7P51798 805 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 TAP2Q03519 686 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
PTPRE-203ENST00000442830 HKDC1Q2TB90 917 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 SP5Q6BEB4 398 aaPredicted RBP13.08□□□□□ -0.32
PTPRE-203ENST00000442830 ZNF470Q6ECI4 717 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 BNC2Q6ZN30 1099 aaPredicted RBP13.08□□□□□ -0.32
PTPRE-203ENST00000442830 PRUNE1Q86TP1 453 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 ZC3H7AQ8IWR0 971 aaKnown RBP13.08□□□□□ -0.32
PTPRE-203ENST00000442830 ARHGEF39Q8N4T4 335 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 HORMAD2Q8N7B1 307 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 CAMKVQ8NCB2 501 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 ZNF480Q8WV37 535 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 ASB11Q8WXH4 323 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 RBSNQ9H1K0 784 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 CCDC177Q9NQR7 707 aaPredicted RBP13.08□□□□□ -0.32
PTPRE-203ENST00000442830 PCNX1Q96RV3 2341 aa13.08□□□□□ -0.32
PTPRE-203ENST00000442830 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
PTPRE-203ENST00000442830 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 SDR42E2A6NKP2 422 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
PTPRE-203ENST00000442830 GFYI3L273 518 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 FOXS1O43638 330 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 NRP2O60462 931 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 SYF2O95926 243 aaKnown RBP13.07□□□□□ -0.32
PTPRE-203ENST00000442830 ITGAMP11215 1152 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 CA7P43166 264 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 RGS4P49798 205 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 ZNF33BQ06732 778 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 KCNJ11Q14654 390 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 FAAH2Q6GMR7 532 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 XKRXQ6PP77 449 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 CENPUQ71F23 418 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 CPEB2Q7Z5Q1 589 aaKnown RBP13.07□□□□□ -0.32
PTPRE-203ENST00000442830 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 EID3Q8N140 333 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 DTWD1Q8N5C7 304 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 GPATCH11Q8N954 259 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 FAM98AQ8NCA5 519 aaKnown RBP13.07□□□□□ -0.32
PTPRE-203ENST00000442830 MCUQ8NE86 351 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 IMMP1LQ96LU5 166 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 TAAR6Q96RI8 345 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 PLA2G3Q9NZ20 509 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 TSR3Q9UJK0 312 aaKnown RBP13.07□□□□□ -0.32
PTPRE-203ENST00000442830 DHRS7Q9Y394 339 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 PKDREJQ9NTG1 2253 aa13.07□□□□□ -0.32
PTPRE-203ENST00000442830 APCP25054 2843 aa13.06□□□□□ -0.32
PTPRE-203ENST00000442830 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
PTPRE-203ENST00000442830 A0A0U1RQJ8 604 aa13.06□□□□□ -0.32
PTPRE-203ENST00000442830 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
PTPRE-203ENST00000442830 PABPN1LA6NDY0 278 aaKnown RBP13.06□□□□□ -0.32
PTPRE-203ENST00000442830 GOLGA8KD6RF30 607 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms