RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 STX11O75558 287 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CABYRO75952 493 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CPNE6O95741 557 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CBX7O95931 251 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 BPGMP07738 259 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 HBQ1P09105 142 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ACSM4P0C7M7 580 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PRR23D2P0DMB1 279 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 GLRA2P23416 452 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DNAJA1P31689 397 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 CTHP32929 405 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CRHR1P34998 444 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MAGEA2P43356 314 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 GNPDA1P46926 289 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 RARRES1P49788 294 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DIO1P49895 249 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 IDH3AP50213 366 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ATP12AP54707 1039 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TRIP4Q15650 581 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 SYT16Q17RD7 645 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PRAMEF13Q5VWM6 474 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TIGD3Q6B0B8 471 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PDE12Q6L8Q7 609 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 TMPRSS11AQ6ZMR5 421 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SPOCD1Q6ZMY3 1216 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC16A12Q6ZSM3 486 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TIPARPQ7Z3E1 657 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 LRP10Q7Z4F1 713 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SYVN1Q86TM6 617 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC26A11Q86WA9 606 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FOXRED2Q8IWF2 684 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PRSS58Q8IYP2 241 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 VWA5B2Q8N398 1253 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF614Q8N883 585 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF321PQ8N8H1 164 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TXNDC5Q8NBS9 432 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF540Q8NDQ6 660 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OR2L5Q8NG80 312 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ADAM32Q8TC27 787 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TSPEARQ8WU66 669 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TCTEX1D2Q8WW35 142 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 COL26A1Q96A83 441 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CENPNQ96H22 339 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 DCLRE1CQ96SD1 692 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 CSF3RQ99062 836 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TSNAXQ99598 290 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 KCNS3Q9BQ31 491 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SLC30A2Q9BRI3 323 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FEM1AQ9BSK4 669 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PTDSS2Q9BVG9 487 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TTLL2Q9BWV7 592 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C1QTNF6Q9BXI9 259 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DDX31Q9H8H2 851 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 IL1RAPQ9NPH3 570 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 LATS2Q9NRM7 1088 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZNF639Q9UID6 485 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ANAPC2Q9UJX6 822 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PPIEQ9UNP9 301 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 CDYLQ9Y232 598 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MRPS23Q9Y3D9 190 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 TNPO3Q9Y5L0 923 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 LYVE1Q9Y5Y7 322 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MN1Q10571 1320 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 NHSQ6T4R5 1651 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SBF1O95248 1867 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 NCANO14594 1321 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MTMR11A4FU01 709 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KPNA7A9QM74 516 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 HACD1B0YJ81 288 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C1orf196B1AJZ1 125 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SPATA31C2B4DYI2 1134 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TEX46H3BTG2 121 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SULT1C2O00338 296 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 STX16O14662 325 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PDCD5O14737 125 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SCAMP1O15126 338 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ORC5O43913 435 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 FAM20BO75063 409 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SOAT2O75908 522 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 KLHL18O94889 574 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 MT-ND1P03886 318 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OR52Z1P0C646 297 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 ZSCAN5DPP0CG00 497 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 C6P13671 934 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 INSRRP14616 1297 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TIMP2P16035 220 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TPH1P17752 444 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 HNF1AP20823 631 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PAICSP22234 425 aaKnown RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 XPAP23025 273 aaPredicted RBP2.7□□□□□ -1.98
LIG4-203ENST00000442234 AKAP5P24588 427 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 SSTR2P30874 369 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 OMPP47874 163 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 VEGFCP49767 419 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 EPHA5P54756 1037 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 CDH13P55290 713 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 PER3P56645 1201 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DCDC1P59894 354 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 TSPAN5P62079 268 aa2.7□□□□□ -1.98
LIG4-203ENST00000442234 DYNLT1P63172 113 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms