RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 OR1D5P58170 312 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 HPCAP84074 193 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 KCNC4Q03721 635 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 KIR2DS5Q14953 304 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 INTS11Q5TA45 600 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 GCNT7Q6ZNI0 430 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 FAM92BQ6ZTR7 304 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 ARHGAP22Q7Z5H3 698 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 AGR3Q8TD06 166 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 CDKN2AIPNLQ96HQ2 116 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 TRIB3Q96RU7 358 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 ATOH8Q96SQ7 321 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 NLNQ9BYT8 704 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 PDFQ9HBH1 243 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCM2LQ9NUG4 571 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 MARCH4Q9P2E8 410 aaPredicted RBP7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 SERTAD3Q9UJW9 196 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 RARRES3Q9UL19 164 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 ACSL5Q9ULC5 683 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 VWA7Q9Y334 891 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 DNAJC15Q9Y5T4 150 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR52A4PA6NMU1 304 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 AKAP10O43572 662 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PCDHGA12O60330 932 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ATP1B2P14415 290 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD1DP15813 335 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MYF6P23409 242 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 FOXA1P55317 472 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 TAS2R38P59533 333 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 TUBA4AP68366 448 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 USP10Q14694 798 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ACAP2Q15057 778 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC36A3Q495N2 470 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PYCR3Q53H96 274 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 XKR7Q5GH72 579 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MTX3Q5HYI7 312 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 AP1ARQ63HQ0 302 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 LCN8Q6JVE9 175 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 B3GNT6Q6ZMB0 384 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PRSS58Q8IYP2 241 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 HIPK4Q8NE63 616 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CEP70Q8NHQ1 597 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCL4L1Q8NHW4 92 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PIH1D2Q8WWB5 315 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 LPGAT1Q92604 370 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 LMLNQ96KR4 655 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ASPSCR1Q9BZE9 553 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CMTM6Q9NX76 183 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MID2Q9UJV3 735 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MGAT4DA6NG13 374 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF839A8K0R7 811 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 EFCAB7A8K855 629 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 E9PQ18 207 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 F3P13726 295 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CAPN3P20807 821 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MLLT3P42568 568 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 HSPA13P48723 471 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CDK9P50750 372 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 KIAA1024LP59773 190 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RPS15P62841 145 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ATP6AP1Q15904 470 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 C6orf132Q5T0Z8 1188 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 DCAF12Q5T6F0 453 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 DUS1LQ6P1R4 473 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 AMIGO2Q86SJ2 522 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CUZD1Q86UP6 607 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RNF148Q8N7C7 305 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPR26Q8NDV2 337 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CATSPER1Q8NEC5 780 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR9I1Q8NGQ6 314 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RAD51AP1Q96B01 352 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 BIRC8Q96P09 236 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 LRRC61Q9BV99 259 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 LRRN3Q9H3W5 708 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 TAS2R13Q9NYV9 303 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CPNE7Q9UBL6 633 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 FBXO5Q9UKT4 447 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MTCL1Q9Y4B5 1905 aaKnown RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCDC187A0A096LP49 1063 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PIPSLA2A3N6 862 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR51F1A6NGY5 319 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF701M0R085 212 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PEX12O00623 359 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PLD2O14939 933 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CLPTM1O96005 669 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 GNAO1P09471 354 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 C1SP09871 688 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 STMN1P16949 149 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ENPP2Q13822 863 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 MYBPC3Q14896 1274 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 COQ5Q5HYK3 327 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 CFAP157Q5JU67 520 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 NKAIN2Q5VXU1 208 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RAB44Q7Z6P3 723 aaPredicted RBP7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RIMKLAQ8IXN7 391 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 ADGRG5Q8IZF4 528 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PDPRQ8NCN5 879 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RCBTB1Q8NDN9 531 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 PATE1Q8WXA2 126 aa7.14□□□□□ -1.27
CDC42BPA-208ENST00000442054 RERGQ96A58 199 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms