RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 P2RX6O15547 441 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 RFPL1O75677 317 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 ALBP02768 609 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 ANXA5P08758 320 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 PLA2G2AP14555 144 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 OTX2P32243 289 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 RPS15AP62244 130 aaKnown RBP22.53■■□□□ 1.2
VARS-217ENST00000440048 SSPNQ14714 243 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 CPZQ66K79 652 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 PRMT9Q6P2P2 845 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 FRA10AC1Q70Z53 315 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 RAB43Q86YS6 212 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 ARHGEF39Q8N4T4 335 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 ABHD17AQ96GS6 310 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 TRIM55Q9BYV6 548 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 ZNF304Q9HCX3 659 aa22.53■■□□□ 1.2
VARS-217ENST00000440048 KCNE1BA0A087WTH5 132 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 TXNDC9O14530 226 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 UMODP07911 640 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 CD1DP15813 335 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 PHBP35232 272 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 CHAF1BQ13112 559 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 SLMAPQ14BN4 828 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 GARNL3Q5VVW2 1013 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 VN1R4Q7Z5H5 301 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 CMC1Q7Z7K0 106 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 ABHD11Q8NFV4 315 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 C9orf43Q8TAL5 461 aaPredicted RBP22.52■■□□□ 1.2
VARS-217ENST00000440048 COL26A1Q96A83 441 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 PTERQ96BW5 349 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 MRRFQ96E11 262 aaKnown RBP22.52■■□□□ 1.2
VARS-217ENST00000440048 THAP11Q96EK4 314 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 UBXN10Q96LJ8 280 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 CYTH2Q99418 400 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 EGFL8Q99944 293 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 SLC26A1Q9H2B4 701 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 CDC42EP4Q9H3Q1 356 aaKnown RBP22.52■■□□□ 1.2
VARS-217ENST00000440048 WDR54Q9H977 334 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 CTSFQ9UBX1 484 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 TLK1Q9UKI8 766 aa22.52■■□□□ 1.2
VARS-217ENST00000440048 MYO18BQ8IUG5 2567 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 FEZF1A0PJY2 475 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 DNAJB5O75953 348 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 STATHP02808 62 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 GMPRP36959 345 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 BCL6P41182 706 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 CCR8P51685 355 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 ATP6V0D1P61421 351 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 ATP1A4Q13733 1029 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 CSHL1Q14406 222 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 NKG7Q16617 165 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 THOC6Q86W42 341 aaKnown RBP22.51■■□□□ 1.19
VARS-217ENST00000440048 OR4K1Q8NGD4 311 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 ING2Q9H160 280 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 ACSS3Q9H6R3 686 aa22.51■■□□□ 1.19
VARS-217ENST00000440048 HEMK1Q9Y5R4 338 aaPredicted RBP22.51■■□□□ 1.19
VARS-217ENST00000440048 TENM4Q6N022 2769 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 MKRN2OSH3BPM6 223 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 LCMT2O60294 686 aaKnown RBP22.5■■□□□ 1.19
VARS-217ENST00000440048 SLC35E2BP0CK96 405 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 GRK3P35626 688 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 HNMTP50135 292 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 TGFBIQ15582 683 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 OR4D1Q15615 310 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 CATSPEREQ5SY80 951 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 RAPH1Q70E73 1250 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 MRGPREQ86SM8 312 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 SLC5A11Q8WWX8 675 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 NEIL2Q969S2 332 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 RHBDF1Q96CC6 855 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 MVB12AQ96EY5 273 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 TSNARE1Q96NA8 513 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 SPSB2Q99619 263 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 FUT8Q9BYC5 575 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 ZNF71Q9NQZ8 489 aaPredicted RBP22.5■■□□□ 1.19
VARS-217ENST00000440048 ACSS2Q9NR19 701 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 CDC14AQ9UNH5 594 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 SLC22A14Q9Y267 594 aa22.5■■□□□ 1.19
VARS-217ENST00000440048 VSTM2BA6NLU5 285 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 ACSL3O95573 720 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 FBLP22087 321 aaKnown RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 CRABP2P29373 138 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 MEF2AQ02078 507 aaPredicted RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 UAP1Q16222 522 aaPredicted RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 C18orf21Q32NC0 220 aaPredicted RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 MROH9Q5TGP6 573 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 PPP1R32Q7Z5V6 425 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 GPSM1Q86YR5 675 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 TM4SF19Q96DZ7 209 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 IP6K3Q96PC2 410 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 MACROD1Q9BQ69 325 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 SOX17Q9H6I2 414 aaPredicted RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 NXT1Q9UKK6 140 aaKnown RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 MRPS2Q9Y399 296 aaKnown RBP22.49■■□□□ 1.19
VARS-217ENST00000440048 DYRK1BQ9Y463 629 aa22.49■■□□□ 1.19
VARS-217ENST00000440048 SCN3AQ9NY46 2000 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 HMX2A2RU54 273 aa22.48■■□□□ 1.19
VARS-217ENST00000440048 NCF1BA6NI72 391 aaPredicted RBP22.48■■□□□ 1.19
VARS-217ENST00000440048 NCF1CA8MVU1 366 aaPredicted RBP22.48■■□□□ 1.19
VARS-217ENST00000440048 J3QKU1 62 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms