RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 PRTGQ2VWP7 1150 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 ARHGAP40Q5TG30 622 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 GARNL3Q5VVW2 1013 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 LCA5Q86VQ0 697 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 TBC1D19Q8N5T2 526 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 CSNK1A1LQ8N752 337 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 AENQ8WTP8 325 aaKnown RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 CAVIN3Q969G5 261 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 NEIL2Q969S2 332 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 TSNARE1Q96NA8 513 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 TMEM79Q9BSE2 394 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 NLNQ9BYT8 704 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 CHST8Q9H2A9 424 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 AKIRIN1Q9H9L7 192 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 PELI2Q9HAT8 420 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 CUTCQ9NTM9 273 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 GPRC5BQ9NZH0 403 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 FARSAQ9Y285 508 aaKnown RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 V9GYY5 206 aaPredicted RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 AHCTF1Q8WYP5 2266 aa11.29□□□□□ -0.6
HSPG2-206ENST00000439717 DSPP15924 2871 aaKnown RBP11.29□□□□□ -0.6
HSPG2-206ENST00000439717 TRBC2A0A5B9 178 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 SUPT3HB4E1H0 165 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 C9J4A7 227 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 MAP2K7O14733 419 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 KATNA1O75449 491 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 SUPT3HO75486 399 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 RFPL1O75677 317 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 SHBGP04278 402 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 MTHFD2P13995 350 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 ALAS2P22557 587 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 F8A1P23610 371 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 CXCR2P25025 360 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 PTPN4P29074 926 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 HSD17B3P37058 310 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 GDF5P43026 501 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 GLRBP48167 497 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 HSPA7P48741 367 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 CDC16Q13042 620 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 MUM1Q2TAK8 710 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 C18orf21Q32NC0 220 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-206ENST00000439717 NKAIN1Q4KMZ8 207 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 TECRLQ5HYJ1 363 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 C1orf189Q5VU69 101 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 PRMT9Q6P2P2 845 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 FAM199XQ6PEV8 388 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-206ENST00000439717 NXPE4Q6UWF7 544 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 FAM198BQ6UWH4 519 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 TTLL10Q6ZVT0 673 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 TDRPQ86YL5 185 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 PLD6Q8N2A8 252 aaKnown RBP11.28□□□□□ -0.6
HSPG2-206ENST00000439717 MFSD9Q8NBP5 474 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 ACMSDQ8TDX5 336 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 UBTD2Q8WUN7 234 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 STARD8Q92502 1023 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 EXT2Q93063 718 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 MVB12AQ96EY5 273 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 CRELD1Q96HD1 420 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 PARD6BQ9BYG5 372 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 CD244Q9BZW8 370 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 STARD5Q9NSY2 213 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 DNAJC11Q9NVH1 559 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 DHCR7Q9UBM7 475 aaKnown RBP11.28□□□□□ -0.6
HSPG2-206ENST00000439717 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 RAB21Q9UL25 225 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 TMCO1Q9UM00 188 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 PKD1L2Q7Z442 2459 aa11.28□□□□□ -0.6
HSPG2-206ENST00000439717 FEZF1A0PJY2 475 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 UBXN8O00124 270 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CLGNO14967 610 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 KLK8O60259 260 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 H2AFYO75367 372 aaKnown RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CREG1O75629 220 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CAPN1P07384 714 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 NUDT17P0C025 328 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 C1GALT1C1LP0DN25 315 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 GFAPP14136 432 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 BCL6P41182 706 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 ALDH18A1P54886 795 aaKnown RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 REEP5Q00765 189 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 RHDQ02161 417 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 NCF4Q15080 339 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 NDUFA9Q16795 377 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CATSPEREQ5SY80 951 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 ATG9BQ674R7 924 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 LCN10Q6JVE6 187 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 METTL2BQ6P1Q9 378 aaKnown RBP11.27□□□□□ -0.61
HSPG2-206ENST00000439717 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 VN1R4Q7Z5H5 301 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 TMPRSS11BQ86T26 416 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 SYVN1Q86TM6 617 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 ASPGQ86U10 573 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 PLD3Q8IV08 490 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 SNX31Q8N9S9 440 aa11.27□□□□□ -0.61
HSPG2-206ENST00000439717 CAMKVQ8NCB2 501 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms