RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZMYND11Q15326 602 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ARMCX4Q5H9R4 360 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 DDI2Q5TDH0 399 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 Q6ZSR9 355 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 STK40Q8N2I9 435 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 L3HYPDHQ96EM0 354 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF599Q96NL3 588 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 CASD1Q96PB1 797 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 CCM2Q9BSQ5 444 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 DRGXA6NNA5 263 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 TTC34A8MYJ7 566 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 UPK1AO00322 258 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SAP18O00422 153 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC22A1O15245 554 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 DYRK3O43781 588 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 TMCC2O75069 709 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 UPK1BO75841 260 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 NUDT7P0C024 238 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ITIH1P19827 911 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 S100A3P33764 101 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 HNF1BP35680 557 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SOX3P41225 446 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CDKN2CP42773 168 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF140P52738 457 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 PPP5CP53041 499 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ERVK-8P63133 956 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 RBM48Q5RL73 367 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 KANK2Q63ZY3 851 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 AMER2Q8N7J2 671 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZFP41Q8N8Y5 198 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 DNASE1L2Q92874 299 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ASB2Q96Q27 587 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 PANX1Q96RD7 426 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 PHOX2BQ99453 314 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CTRCQ99895 268 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 C2orf49Q9BVC5 232 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 GPN2Q9H9Y4 310 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 GPRC5BQ9NZH0 403 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SRRDQ9UH36 339 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 VPS9D1Q9Y2B5 631 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SPEF1Q9Y4P9 236 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 AKR7A2O43488 359 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 NUAK1O60285 661 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CPNE6O95741 557 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 LRG1P02750 347 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 PGRP06401 933 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CCNYL3P0C7X3 344 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CBLP22681 906 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 TACR1P25103 407 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC15A1P46059 708 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 RPP38P78345 283 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 AFMIDQ63HM1 303 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 Q6ZVU0 165 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 UBE2R2Q712K3 238 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ADAMTSL2Q86TH1 951 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 WDR36Q8NI36 951 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ADAMTS16Q8TE57 1224 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 MGME1Q9BQP7 344 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF717Q9BY31 904 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 HOXD1Q9GZZ0 328 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 REEP1Q9H902 201 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC22A14Q9Y267 594 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 RANBP2P49792 3224 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SBF1O95248 1867 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SIP14410 1827 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 RFXANKO14593 260 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 INPPL1O15357 1258 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 PLOD3O60568 738 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 OTCP00480 354 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CD70P32970 193 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC26A3P40879 764 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CDH12P55289 794 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 CACNG1Q06432 222 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC14A1Q13336 389 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 STARD3Q14849 445 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 LAIR2Q6ISS4 152 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 FAM131AQ6UXB0 335 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF683Q8IZ20 524 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 TTC30BQ8N4P2 665 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 RHOXF1Q8NHV9 184 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 ING5Q8WYH8 240 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 APOL4Q9BPW4 351 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 RMND5AQ9H871 391 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 LRTM1Q9HBL6 345 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 IL26Q9NPH9 171 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC9A8Q9Y2E8 581 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 MED16Q9Y2X0 877 aa9.63□□□□□ -0.87
CDC42SE1-202ENST00000439374 SPTBP11277 2137 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 GNG14A0A1W2PPG7 69 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 FAM234BA2RU67 622 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TSPAN4O14817 238 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 HOXC11O43248 304 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 RGS14O43566 566 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms