RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 M0R082 166 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 NIPSNAP2O75323 286 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 CLDN1O95832 211 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 SYF2O95926 243 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 ZSCAN5DPP0CG00 497 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 ETS1P14921 441 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 EZRP15311 586 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 MGAT1P26572 445 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 NMBRP28336 390 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 RPL22P35268 128 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 ADH7P40394 386 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 CASP6P55212 293 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 EEF1A2Q05639 463 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 THOC5Q13769 683 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 GRB7Q14451 532 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 ARHGAP19Q14CB8 494 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 INAQ16352 499 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 CCNG2Q16589 344 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 NDUFA9Q16795 377 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 LONRF1Q17RB8 773 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 MFSD4BQ5TF39 518 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 ABHD17BQ5VST6 288 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 FRMPD2BQ6IN97 320 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 NDUFAF7Q7L592 441 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 PRUNE1Q86TP1 453 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 KCNMB4Q86W47 210 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 OR4N4Q8N0Y3 316 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 SLC34A3Q8N130 599 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 OR9A1PQ8NGU1 263 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 ZNF417Q8TAU3 575 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 FAR1Q8WVX9 515 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 METTL21AQ8WXB1 218 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 C8orf44Q96CB5 159 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 MOCOSQ96EN8 888 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 MMABQ96EY8 250 aaPredicted RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 LMF1Q96S06 567 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 ZNF587Q96SQ5 575 aaPredicted RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 EBNA1BP2Q99848 306 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 DRC3Q9H069 523 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 P2RY12Q9H244 342 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 MKKSQ9NPJ1 570 aaPredicted RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 TREX1Q9NSU2 369 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 TAC3Q9UHF0 121 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 PCYOX1Q9UHG3 505 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 MRPS2Q9Y399 296 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 KLK4Q9Y5K2 254 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 CSAG2Q9Y5P2 127 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 SVILO95425 2214 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 DIDO1Q9BTC0 2240 aaKnown RBP7.39□□□□□ -1.23
VPS50-204ENST00000438395 PIKFYVEQ9Y2I7 2098 aa7.39□□□□□ -1.23
VPS50-204ENST00000438395 OR2A25A4D2G3 310 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 KRT87PA6NCN2 255 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 WIPF3A6NGB9 483 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 VSTM2BA6NLU5 285 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 ARHGEF33A8MVX0 844 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 H0YGG7 62 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 GOLGA8TH3BQL2 631 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 HNRNPRO43390 633 aaKnown RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 NRDCO43847 1150 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 CEP104O60308 925 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 JRKO75564 520 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 BMP10O95393 424 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 CRYABP02511 175 aaKnown RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 FGGP02679 453 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 SERPINA7P05543 415 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 PRR35P0CG20 571 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 ICAM2P13598 275 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 OGNP20774 298 aaKnown RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 CDC25BP30305 580 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 AVPR1BP47901 424 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 VPS41P49754 854 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 TERF1P54274 439 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 PNLIPRP1P54315 467 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 ARF3P61204 181 aaPredicted RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 ABATP80404 500 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 RBPJQ06330 500 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 TYSND1Q2T9J0 566 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 MINDY4Q4G0A6 757 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 CCSMST1Q4G0I0 132 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 VWA2Q5GFL6 755 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 CTSL3PQ5NE16 218 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 GARNL3Q5VVW2 1013 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 ICE2Q659A1 982 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 ZNF470Q6ECI4 717 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 FAAH2Q6GMR7 532 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 KIAA0930Q6ICG6 404 aaPredicted RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 NEPROQ6NW34 567 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 DRICH1Q6PGQ1 229 aaPredicted RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 SUSD1Q6UWL2 747 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 IGFL2Q6UWQ7 119 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 GFRALQ6UXV0 394 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 FJX1Q86VR8 437 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 SIRT6Q8N6T7 355 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 OR2A1Q8NGT9 310 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 GABPB2Q8TAK5 448 aaPredicted RBP7.38□□□□□ -1.23
VPS50-204ENST00000438395 MCOLN3Q8TDD5 553 aa7.38□□□□□ -1.23
VPS50-204ENST00000438395 BRIX1Q8TDN6 353 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms