RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 RAPH1Q70E73 1250 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 CCDC91Q7Z6B0 441 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 GPSM1Q86YR5 675 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 PLD3Q8IV08 490 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 IFT20Q8IY31 132 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 TBC1D19Q8N5T2 526 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 ABHD11Q8NFV4 315 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 PTERQ96BW5 349 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 SLC25A18Q9H1K4 315 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 CDC42EP4Q9H3Q1 356 aaKnown RBP15.5■□□□□ 0.07
SMPD4-207ENST00000435455 NXT1Q9UKK6 140 aaKnown RBP15.5■□□□□ 0.07
SMPD4-207ENST00000435455 SH2B3Q9UQQ2 575 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 RUVBL1Q9Y265 456 aaKnown RBP15.5■□□□□ 0.07
SMPD4-207ENST00000435455 CNOT3O75175 753 aaKnown RBP15.49■□□□□ 0.07
SMPD4-207ENST00000435455 IGHEP01854 428 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 CD1DP15813 335 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 ECHS1P30084 290 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 OTX2P32243 289 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 OR1D4P47884 311 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 COL9A2Q14055 689 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-207ENST00000435455 TGFBIQ15582 683 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 HKDC1Q2TB90 917 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 FAM69BQ5VUD6 431 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 COX15Q7KZN9 410 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 TBC1D1Q86TI0 1168 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-207ENST00000435455 THOC6Q86W42 341 aaKnown RBP15.49■□□□□ 0.07
SMPD4-207ENST00000435455 TCAIMQ8N3R3 496 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 CAMKVQ8NCB2 501 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 OR4K1Q8NGD4 311 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 C9orf43Q8TAL5 461 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-207ENST00000435455 UBXN10Q96LJ8 280 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 OR4K3Q96R72 315 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 FUT8Q9BYC5 575 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 SYNPO2LQ9H987 977 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 TLK1Q9UKI8 766 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 DYRK1BQ9Y463 629 aa15.49■□□□□ 0.07
SMPD4-207ENST00000435455 P2RX6O15547 441 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 MED26O95402 600 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 ACSL3O95573 720 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 SLC35E2BP0CK96 405 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 FBLP22087 321 aaKnown RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 SLC26A3P40879 764 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 RRADP55042 308 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 OCA2Q04671 838 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 FAM53BQ14153 422 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 CSHL1Q14406 222 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 UAP1Q16222 522 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 MED25Q71SY5 747 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 VN1R4Q7Z5H5 301 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 CMC1Q7Z7K0 106 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 MRGPREQ86SM8 312 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 KLHDC8AQ8IYD2 350 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 SPATA6LQ8N4H0 392 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 ARHGEF39Q8N4T4 335 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 METTL27Q8N6F8 245 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 TMEM102Q8N9M5 508 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 SLC5A11Q8WWX8 675 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 KIAA1191Q96A73 305 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 COL26A1Q96A83 441 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 NACC2Q96BF6 587 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 RHBDF1Q96CC6 855 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 MRRFQ96E11 262 aaKnown RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 SARGQ9BW04 601 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 DRC3Q9H069 523 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 CNOT10Q9H9A5 744 aaKnown RBP15.48■□□□□ 0.07
SMPD4-207ENST00000435455 PELI2Q9HAT8 420 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 NMRAL1Q9HBL8 299 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 ACSS2Q9NR19 701 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 KCNE2Q9Y6J6 123 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 MAU2Q9Y6X3 613 aa15.48■□□□□ 0.07
SMPD4-207ENST00000435455 TRBC2A0A5B9 178 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 FEZF1A0PJY2 475 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 ARGFXA6NJG6 315 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 PEX12O00623 359 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 IPO13O94829 963 aaKnown RBP15.47■□□□□ 0.07
SMPD4-207ENST00000435455 S100BP04271 92 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-207ENST00000435455 UMODP07911 640 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 INHBAP08476 426 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 LTA4HP09960 611 aaKnown RBP15.47■□□□□ 0.07
SMPD4-207ENST00000435455 BCL6P41182 706 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 NFATC3Q12968 1075 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 ATP1A4Q13733 1029 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 DSG2Q14126 1118 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 NKG7Q16617 165 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 MROH9Q5TGP6 573 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 NUP210LQ5VU65 1888 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 TAOK1Q7L7X3 1001 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 MFSD9Q8NBP5 474 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 NEIL2Q969S2 332 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 MMABQ96EY8 250 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-207ENST00000435455 ABHD17AQ96GS6 310 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 TSNARE1Q96NA8 513 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 SPSB2Q99619 263 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 UNKQ9C0B0 810 aaKnown RBP15.47■□□□□ 0.07
SMPD4-207ENST00000435455 ING2Q9H160 280 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 CTSFQ9UBX1 484 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 ZNF282Q9UDV7 671 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-207ENST00000435455 RNF112Q9ULX5 631 aa15.47■□□□□ 0.07
SMPD4-207ENST00000435455 NFU1Q9UMS0 254 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms