RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PAGE2BQ5JRK9 111 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 LCTLQ6UWM7 567 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 USP30Q70CQ3 517 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 RD3Q7Z3Z2 195 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 GPR180Q86V85 440 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 PTRH1Q86Y79 214 aaKnown RBP16.05■□□□□ 0.16
USHBP1-203ENST00000431146 LAS2Q8IYD9 372 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 LINC01555Q8NAE3 123 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 CHTF18Q8WVB6 975 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 PPWD1Q96BP3 646 aaKnown RBP16.05■□□□□ 0.16
USHBP1-203ENST00000431146 TESCQ96BS2 214 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 REPS1Q96D71 796 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 PDXPQ96GD0 296 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 VCX3BQ9H321 246 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 DMRT3Q9NQL9 472 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 LRCH1Q9Y2L9 728 aa16.05■□□□□ 0.16
USHBP1-203ENST00000431146 SNRNP200O75643 2136 aaKnown RBP16.05■□□□□ 0.16
USHBP1-203ENST00000431146 GNG14A0A1W2PPG7 69 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 DHRS12A0PJE2 317 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 ERGP11308 486 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 COX7A2P14406 83 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 POU3F3P20264 500 aaPredicted RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 CYP4F3Q08477 520 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 HIST2H2ACQ16777 129 aaPredicted RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 CYP51A1Q16850 503 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 EOGTQ5NDL2 527 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 HIST2H2AA3Q6FI13 130 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 HMBOX1Q6NT76 420 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 TBC1D21Q8IYX1 336 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 C10orf111Q8N326 155 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 OR8J3Q8NGG0 315 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 ZNF583Q96ND8 569 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 TIMM29Q9BSF4 260 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 TBCDQ9BTW9 1192 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 TRIM15Q9C019 465 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 REXO4Q9GZR2 422 aaKnown RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 EHD1Q9H4M9 534 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 RPF2Q9H7B2 306 aaKnown RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 PRSS38A1L453 326 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 AQP12BA6NM10 295 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 MYO1DO94832 1006 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 ACPPP15309 386 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 PRPS1L1P21108 318 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 HTR1EP28566 365 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 KIR3DL1P43629 444 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 SPATS1Q496A3 300 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 CMPK2Q5EBM0 449 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 TBCELQ5QJ74 424 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 ENPP7Q6UWV6 458 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 PRR23BQ6ZRT6 265 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 ARMCX6Q7L4S7 300 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 TRIM73Q86UV7 250 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 C17orf64Q86WR6 236 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 AQP12AQ8IXF9 295 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 FAM9CQ8IZT9 166 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 DTWD1Q8N5C7 304 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 DUS3LQ96G46 650 aaKnown RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 SCHIP1Q9P0W5 487 aaPredicted RBP16.04■□□□□ 0.16
USHBP1-203ENST00000431146 MMP17Q9ULZ9 603 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
USHBP1-203ENST00000431146 GON4LQ3T8J9 2241 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 A0A1W2PPV9 198 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 FEZF1A0PJY2 475 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 AXIN1O15169 862 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 YY2O15391 372 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 PCDH7O60245 1069 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 CYP4F2P78329 520 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 KRT33BQ14525 404 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 CYP2A13Q16696 494 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 RUNDC3AQ59EK9 446 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 MTX3Q5HYI7 312 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 GLYATQ6IB77 296 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 TMIGD1Q6UXZ0 262 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 GCNT7Q6ZNI0 430 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 VN1R5Q7Z5H4 357 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 FAM20CQ8IXL6 584 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 PGBD3Q8N328 593 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 GALNT4Q8N4A0 578 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 WDR48Q8TAF3 677 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 JPH3Q8WXH2 748 aaPredicted RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 OR1E3Q8WZA6 343 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 TSACCQ96A04 125 aaPredicted RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 ITCHQ96J02 903 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 BMFQ96LC9 184 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 CAMK1GQ96NX5 476 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 HHIPQ96QV1 700 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 HAUS8Q9BT25 410 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 CCM2LQ9NUG4 571 aaPredicted RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 EBF1Q9UH73 591 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 PNMA8BQ9ULN7 279 aaPredicted RBP16.03■□□□□ 0.16
USHBP1-203ENST00000431146 TRBV5-3A0A0A0MS03 114 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 TCRBV5S2A0A599 114 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 ARHGAP10A1A4S6 786 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 H7BY64 318 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 MT-ND1P03886 318 aa16.03■□□□□ 0.16
USHBP1-203ENST00000431146 LAMP1P11279 417 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms