RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TGFB1P01137 390 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 PRSS56P0CW18 603 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 CD27P26842 260 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 CSNK1EP49674 416 aaKnown RBP12.52□□□□□ -0.4
PTCH1-207ENST00000429896 NIPAL1Q6NVV3 410 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 KBTBD2Q8IY47 623 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.4
PTCH1-207ENST00000429896 ADAMTS15Q8TE58 950 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 REXO5Q96IC2 774 aaKnown RBP12.52□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF354BQ96LW1 612 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF778Q96MU6 729 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 PRRG4Q9BZD6 226 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 SLCO1B3Q9NPD5 702 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 PRDM8Q9NQV8 689 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 MYH15Q9Y2K3 1946 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 H3BNH8 94 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 PROCP04070 461 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 SERPINA6P08185 405 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 COX4I1P13073 169 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 GDF5P43026 501 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 TRMT5Q32P41 509 aaKnown RBP12.52□□□□□ -0.41
PTCH1-207ENST00000429896 SAMD4BQ5PRF9 694 aaKnown RBP12.52□□□□□ -0.41
PTCH1-207ENST00000429896 ARMC8Q8IUR7 673 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 GPR150Q8NGU9 434 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 RP9Q8TA86 221 aaKnown RBP12.52□□□□□ -0.41
PTCH1-207ENST00000429896 GINS4Q9BRT9 223 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 MOCS1Q9NZB8 636 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 BCL10O95999 233 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 JUPP14923 745 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 FRG2Q64ET8 278 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 FRG2BQ96QU4 278 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 MMADHCQ9H3L0 296 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-207ENST00000429896 DIABLOQ9NR28 239 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 CLOCKO15516 846 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 STATHP02808 62 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 PRG2P13727 222 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 CD1DP15813 335 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF24P17028 368 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 KPNB1Q14974 876 aaKnown RBP12.52□□□□□ -0.41
PTCH1-207ENST00000429896 ALG11Q2TAA5 492 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 RPTNQ6XPR3 784 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 ADCY4Q8NFM4 1077 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.41
PTCH1-207ENST00000429896 PMEPA1Q969W9 287 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 A0A0G2JN53 185 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 DYTNA2CJ06 578 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 STX16-NPEPL1H3BU86 382 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 STX16O14662 325 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 OPRD1P41143 372 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 NUP107P57740 925 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 TRIM61Q5EBN2 209 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 TMIGD1Q6UXZ0 262 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 ADAMTS19Q8TE59 1207 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 MR1Q95460 341 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 HBEGFQ99075 208 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.41
PTCH1-207ENST00000429896 PCDH7O60245 1069 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 FKBP6O75344 327 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 DEF8Q6ZN54 512 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 CYS1Q717R9 158 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 CNPPD1Q9BV87 410 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 VPS29Q9UBQ0 182 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 FAM58BPP0C7Q3 252 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 ATXN1LP0C7T5 689 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 ADRA1AP35348 466 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 POLR2JP52435 117 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 CDKN2DP55273 166 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 TRAF3Q13114 568 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF781Q8N8C0 355 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 SMYD1Q8NB12 490 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 DLG3Q92796 817 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PDP2Q9P2J9 529 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 KIR2DS5A0A0G2JLQ3 304 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 A0A0G2JNG1 304 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 KIR2DS3K7RE56 304 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PEX12O00623 359 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 LDB2O43679 373 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 CDKN1CP49918 316 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 RACK1P63244 317 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 UBAP2LQ14157 1087 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 KIR2DS5Q14953 304 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 FAM214AQ32MH5 1076 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 NDUFAF6Q330K2 333 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 SPIN4Q56A73 249 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 GAL3ST4Q96RP7 486 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 LOC730098B7Z3J9 87 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 ZSCAN1Q8NBB4 408 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 TIMM29Q9BSF4 260 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 KCNH6Q9H252 994 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 EHD3Q9NZN3 535 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 HS3ST3A1Q9Y663 406 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 CENPXA8MT69 81 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 LDLRP01130 860 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PROS1P07225 676 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms