RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CAMKVQ8NCB2 501 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TMEM125Q96AQ2 219 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TMIGD2Q96BF3 282 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 DUSP23Q9BVJ7 150 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 CHID1Q9BWS9 393 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 ZBTB26Q9HCK0 441 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 CSNK1G1Q9HCP0 422 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PRSS16Q9NQE7 514 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 GIMAP2Q9UG22 337 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PIP5K1BO14986 540 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 ERI3O43414 337 aaKnown RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 NPHS1O60500 1241 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TSC22D2O75157 780 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 REM1O75628 298 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 KCNH1O95259 989 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PROS1P07225 676 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 C8GP07360 202 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 MAPKAPK3Q16644 382 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 DGUOKQ16854 277 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 KIAA0930Q6ICG6 404 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TMEM214Q6NUQ4 689 aaKnown RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SPESP1Q6UW49 350 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PARS2Q7L3T8 475 aaKnown RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 CDK20Q8IZL9 346 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TCAIMQ8N3R3 496 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 ADAP2Q9NPF8 381 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 WNT16Q9UBV4 365 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 LEF1Q9UJU2 399 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SNX7Q9UNH6 387 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 IRAK3Q9Y616 596 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 LY75O60449 1722 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SH3PXD2BA1X283 911 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 A8MT66 165 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 K7EPI3 171 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SNPHO15079 494 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 NDUFS4O43181 175 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 IGFALSP35858 605 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 BCAP31P51572 246 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 C2orf80Q0P641 193 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF846Q147U1 533 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SLCO6A1Q86UG4 719 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 POMGNT2Q8NAT1 580 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 CEP76Q8TAP6 659 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SLC13A3Q8WWT9 602 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 VPS33AQ96AX1 596 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PPCDCQ96CD2 204 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 LRIT1Q9P2V4 623 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 EMCNQ9ULC0 261 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TMCC3Q9ULS5 477 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 CDK5RAP2Q96SN8 1893 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SCN4AP35499 1836 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 LAMB2P55268 1798 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 FAM227AF5H4B4 570 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 CDC123O75794 336 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 OGNP20774 298 aaKnown RBP10.33□□□□□ -0.76
TCOF1-204ENST00000427724 KCNJ5P48544 419 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PER3P56645 1201 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 BNIP2Q12982 314 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 FGL2Q14314 439 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 PPP1R3AQ16821 1122 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 KCTD8Q6ZWB6 473 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 VN1R5Q7Z5H4 357 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 ADAMTS15Q8TE58 950 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 TPD52L3Q96J77 140 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 MYRFLQ96LU7 910 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 SORT1Q99523 831 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 ROGDIQ9GZN7 287 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 C3orf14Q9HBI5 128 aa10.33□□□□□ -0.76
TCOF1-204ENST00000427724 KRT87PA6NCN2 255 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 C2orf74A8MZ97 194 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TNFRSF10BO14763 440 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 VPS4BO75351 444 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SLC25A12O75746 678 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 NOS3P29474 1203 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 HOXD12P35452 270 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TPMTP51580 245 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 RPS7P62081 194 aaKnown RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SIGLEC14Q08ET2 396 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF155Q12901 538 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 STEAP4Q687X5 459 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TTLL10Q6ZVT0 673 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 RNF44Q7L0R7 432 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 AKAP14Q86UN6 197 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF563Q8TA94 476 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ASB9Q96DX5 294 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TBCCD1Q9NVR7 557 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 IMPAD1Q9NX62 359 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 MTMR10Q9NXD2 777 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF490Q9ULM2 529 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 USP3Q9Y6I4 520 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 MUC6Q6W4X9 2439 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 PSMD11O00231 422 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 CLIC3O95833 236 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TGFB1P01137 390 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 IFNA14P01570 189 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 IDO1P14902 403 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ITGB7P26010 798 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 CCR8P51685 355 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms