RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 IRAK4Q9NWZ3 460 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 PLLPQ9Y342 182 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 CEP295Q9C0D2 2601 aa23.41■■□□□ 1.34
VEGFA-209ENST00000425836 SNRNP200O75643 2136 aaKnown RBP23.41■■□□□ 1.34
VEGFA-209ENST00000425836 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 G3V2L1 256 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 STMND1H3BQB6 276 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 E2F3O00716 465 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 ZSCAN9O15535 394 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 DLGAP3O95886 979 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 MYZAPP0CAP1 466 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 EPB42P16452 691 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 REEP5Q00765 189 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 TLDC1Q6P9B6 456 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 TIPARPQ7Z3E1 657 aaKnown RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 SLC38A9Q8NBW4 561 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 SNIP1Q8TAD8 396 aaKnown RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 THAP11Q96EK4 314 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 AIF1LQ9BQI0 150 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 EHD1Q9H4M9 534 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 GEMIN8Q9NWZ8 242 aaKnown RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 ANGPTL3Q9Y5C1 460 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 AP1M2Q9Y6Q5 423 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 TRBC2A0A5B9 178 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 FITM1A5D6W6 292 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 EIF2S1P05198 315 aaKnown RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 PCBP4P57723 403 aaKnown RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 PCDH1Q08174 1060 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 ZYG11AQ6WRX3 759 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 GOLGA7Q7Z5G4 137 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 DTX1Q86Y01 620 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 MFSD9Q8NBP5 474 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 RERGQ96A58 199 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 WDR34Q96EX3 536 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 RUFY1Q96T51 708 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 ACTR5Q9H9F9 607 aaPredicted RBP23.4■■□□□ 1.34
VEGFA-209ENST00000425836 PCTPQ9UKL6 214 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 PCDHGA4Q9Y5G9 962 aa23.4■■□□□ 1.34
VEGFA-209ENST00000425836 FREM2Q5SZK8 3169 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 TEX51A0A1B0GUA7 166 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 OR1F1O43749 312 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 CPNE3O75131 537 aaKnown RBP23.39■■□□□ 1.33
VEGFA-209ENST00000425836 H2AFYO75367 372 aaKnown RBP23.39■■□□□ 1.33
VEGFA-209ENST00000425836 PRKAA2P54646 552 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 IRF8Q02556 426 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 GTF2H2Q13888 395 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 COL9A2Q14055 689 aaPredicted RBP23.39■■□□□ 1.33
VEGFA-209ENST00000425836 DOC2AQ14183 400 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 XKR6Q5GH73 641 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 GTF2H2CQ6P1K8 395 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 HDXQ7Z353 690 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 VN1R4Q7Z5H5 301 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 CSNK1A1LQ8N752 337 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 C1QTNF3Q9BXJ4 246 aa23.39■■□□□ 1.33
VEGFA-209ENST00000425836 IQCGQ9H095 443 aaKnown RBP23.39■■□□□ 1.33
VEGFA-209ENST00000425836 PCM1Q15154 2024 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 TMEM8BA6NDV4 472 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 AGPSO00116 658 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 TYROBPO43914 113 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 RPS17P08708 135 aaKnown RBP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 MYL2P10916 166 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 CASP2P42575 452 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 GCGRP47871 477 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 SCTRP47872 440 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 HERVK_113P63132 956 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 CHIT1Q13231 466 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 SLBPQ14493 270 aaKnown RBP eCLIP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 GRM7Q14831 915 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 TBCCQ15814 346 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 PRTGQ2VWP7 1150 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 C6orf15Q6UXA7 325 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 SLC22A9Q8IVM8 553 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 CCDC63Q8NA47 563 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 KDF1Q8NAX2 398 aaPredicted RBP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 GALNT6Q8NCL4 622 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 RDH11Q8TC12 318 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 TCP10LQ8TDR4 215 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 ZCCHC14Q8WYQ9 949 aaKnown RBP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 PTCD3Q96EY7 689 aaKnown RBP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 NSUN5Q96P11 429 aaKnown RBP23.38■■□□□ 1.33
VEGFA-209ENST00000425836 ERVK-6Q9BXR3 956 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 TMBIM4Q9HC24 238 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 SLC17A7Q9P2U7 560 aa23.38■■□□□ 1.33
VEGFA-209ENST00000425836 TAF4O00268 1085 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 WFS1O76024 890 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 LIPCP11150 499 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 CD22P20273 847 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 CXCR2P25025 360 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 PIK3CGP48736 1102 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 E2F2Q14209 437 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 RBBP5Q15291 538 aaKnown RBP23.37■■□□□ 1.33
VEGFA-209ENST00000425836 TGIF1Q15583 401 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 HKDC1Q2TB90 917 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 PROSER1Q86XN7 944 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 TBC1D19Q8N5T2 526 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 ZNF248Q8NDW4 579 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 ARMC2Q8NEN0 867 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 TMEM237Q96Q45 408 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 IPPKQ9H8X2 491 aa23.37■■□□□ 1.33
VEGFA-209ENST00000425836 ZBTB26Q9HCK0 441 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms