RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SERPINA6P08185 405 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 GIMD1P0DJR0 217 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 PCNAP12004 261 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 TYRP1P17643 537 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 NCF2P19878 526 aaPredicted RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 VARSP26640 1264 aaKnown RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 EPHA3P29320 983 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 ALDH4A1P30038 563 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 AHRP35869 848 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SF3A3Q12874 501 aaKnown RBP eCLIP9.93□□□□□ -0.82
MDC1-205ENST00000425072 CSTF3Q12996 717 aaKnown RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 SQSTM1Q13501 440 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SLBPQ14493 270 aaKnown RBP eCLIP9.93□□□□□ -0.82
MDC1-205ENST00000425072 NR1D2Q14995 579 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 ABRAXAS2Q15018 415 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 RPS6KA2Q15349 733 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 LSM12Q3MHD2 195 aaKnown RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 SLC9B1Q4ZJI4 515 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 ATP6AP1LQ52LC2 224 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SPDYAQ5MJ70 313 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 VWA5B1Q5TIE3 1220 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 PRAMEF9Q5VWM5 478 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 FIGLAQ6QHK4 219 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SPESP1Q6UW49 350 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 DBX2Q6ZNG2 339 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 ZNF438Q7Z4V0 828 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 GATAD2AQ86YP4 633 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 PLXDC1Q8IUK5 500 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SLC35F3Q8IY50 421 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 CARFQ8N187 725 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 MINDY1Q8N5J2 469 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 EID2Q8N6I1 236 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 DCBLD1Q8N8Z6 715 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 TRPV3Q8NET8 790 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 MTFMTQ96DP5 389 aaKnown RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 APOLD1Q96LR9 279 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 CD180Q99467 661 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SERPINI1Q99574 410 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 DPYSL5Q9BPU6 564 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 CENPKQ9BS16 269 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 SARGQ9BW04 601 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 TBC1D10AQ9BXI6 508 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 RHBGQ9H310 441 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 WDR55Q9H6Y2 383 aaPredicted RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 AKTIPQ9H8T0 292 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 TNFRSF12AQ9NP84 129 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 C1GALT1Q9NS00 363 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
MDC1-205ENST00000425072 SPHK1Q9NYA1 384 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 VPS29Q9UBQ0 182 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 PPT2Q9UMR5 302 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 BOLA1Q9Y3E2 137 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 KLK4Q9Y5K2 254 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 RNF215Q9Y6U7 377 aa9.93□□□□□ -0.82
MDC1-205ENST00000425072 UNC13CQ8NB66 2214 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 KCNE1BA0A087WTH5 132 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 A0A0J9YY10 115 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 EME2A4GXA9 379 aaPredicted RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 CCT8L1PA6NM43 557 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 NPIPB8E9PQR5 432 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 TRIM38O00635 465 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 UBDO15205 165 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 SIGLEC6O43699 453 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 SEC22BO75396 215 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 MYO1DO94832 1006 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 UGT2B7P16662 529 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 PRPH2P23942 346 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 GRIA3P42263 894 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 GRK6P43250 576 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 RPS15AP62244 130 aaKnown RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 CSNK1G2P78368 415 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 EMX2Q04743 252 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 CLPPQ16740 277 aaPredicted RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 GSTA3Q16772 222 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 AP5B1Q2VPB7 878 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 ZC3H12BQ5HYM0 836 aaKnown RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 MANEAQ5SRI9 462 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 ZNF425Q6IV72 752 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 OGFOD2Q6N063 350 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 SCIMPQ6UWF3 145 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 Q6ZSR9 355 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 TRPM8Q7Z2W7 1104 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 MTDHQ86UE4 582 aaKnown RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 SFTPA2Q8IWL1 248 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 KYQ8NBH2 561 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 SUMF1Q8NBK3 374 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 SRFBP1Q8NEF9 429 aaKnown RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 HUS1BQ8NHY5 278 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 WDR20Q8TBZ3 569 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 JPH3Q8WXH2 748 aaPredicted RBP9.92□□□□□ -0.82
MDC1-205ENST00000425072 NCSTNQ92542 709 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 CMTM7Q96FZ5 175 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 PPP1R36Q96LQ0 422 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 EBF4Q9BQW3 602 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 SEMA6CQ9H3T2 930 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 TUBB1Q9H4B7 451 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 CAAP1Q9H8G2 361 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 IL21RQ9HBE5 538 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 C1orf109Q9NX04 203 aa9.92□□□□□ -0.82
MDC1-205ENST00000425072 EIF3LQ9Y262 564 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms