RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ATG10Q9H0Y0 220 aa17.55■□□□□ 0.4
NUP50-207ENST00000424634 PPANQ9NQ55 473 aaKnown RBP17.55■□□□□ 0.4
NUP50-207ENST00000424634 CCDC177Q9NQR7 707 aaPredicted RBP17.55■□□□□ 0.4
NUP50-207ENST00000424634 TMEM184CQ9NVA4 438 aa17.55■□□□□ 0.4
NUP50-207ENST00000424634 TRPC4Q9UBN4 977 aa17.55■□□□□ 0.4
NUP50-207ENST00000424634 HIVEP3Q5T1R4 2406 aa17.55■□□□□ 0.4
NUP50-207ENST00000424634 NBPF19A0A087WUL8 3843 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 A0A0A6YYC8 382 aaPredicted RBP17.54■□□□□ 0.4
NUP50-207ENST00000424634 I3L1I5 382 aaPredicted RBP17.54■□□□□ 0.4
NUP50-207ENST00000424634 SLC16A5O15375 505 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 KLHL41O60662 606 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 IPO13O94829 963 aaKnown RBP17.54■□□□□ 0.4
NUP50-207ENST00000424634 EFNA3P52797 238 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 CSNK1G2P78368 415 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 SYT16Q17RD7 645 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 LRRC8EQ6NSJ5 796 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 IGFL2Q6UWQ7 119 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 Q6ZS92 163 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 CUZD1Q86UP6 607 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 ZADH2Q8N4Q0 377 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 CISD2Q8N5K1 135 aaKnown RBP17.54■□□□□ 0.4
NUP50-207ENST00000424634 AMER2Q8N7J2 671 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 GABPB2Q8TAK5 448 aaPredicted RBP17.54■□□□□ 0.4
NUP50-207ENST00000424634 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
NUP50-207ENST00000424634 OLFM1Q99784 485 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 MACROD1Q9BQ69 325 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 YIPF2Q9BWQ6 316 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 VWA7Q9Y334 891 aa17.54■□□□□ 0.4
NUP50-207ENST00000424634 KCNE1BA0A087WTH5 132 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 IDSB3KWA1 339 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 TXNDC9O14530 226 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 LCMT2O60294 686 aaKnown RBP17.53■□□□□ 0.4
NUP50-207ENST00000424634 SEC31AO94979 1220 aaKnown RBP17.53■□□□□ 0.4
NUP50-207ENST00000424634 EMP2P54851 167 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 MRPL49Q13405 166 aaKnown RBP17.53■□□□□ 0.4
NUP50-207ENST00000424634 NAE1Q13564 534 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 FAM53BQ14153 422 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 HIF1AQ16665 826 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 HECTD2Q5U5R9 776 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 ANKMY2Q8IV38 441 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 MYO1HQ8N1T3 1032 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 THOC3Q96J01 351 aaKnown RBP17.53■□□□□ 0.4
NUP50-207ENST00000424634 SGPP1Q9BX95 441 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 TRIM31Q9BZY9 425 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 TGIF2Q9GZN2 237 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 LHPPQ9H008 270 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 DRC3Q9H069 523 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 ZNF160Q9HCG1 818 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 ASF1BQ9NVP2 202 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 IKZF3Q9UKT9 509 aa17.53■□□□□ 0.4
NUP50-207ENST00000424634 SPTBN1Q01082 2364 aaKnown RBP17.52■□□□□ 0.4
NUP50-207ENST00000424634 FEZF1A0PJY2 475 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 KLHL18O94889 574 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 HPP00738 406 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 ACPPP15309 386 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 NPPBP16860 134 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 FDXRP22570 491 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 HRH2P25021 359 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 IL2P60568 153 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 MAT1AQ00266 395 aaKnown RBP17.52■□□□□ 0.4
NUP50-207ENST00000424634 SP140Q13342 867 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 FASTKD3Q14CZ7 662 aaKnown RBP17.52■□□□□ 0.4
NUP50-207ENST00000424634 AGAP7PQ5VUJ5 663 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 TMEM207Q6UWW9 146 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 PRSS41Q7RTY9 318 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 PALM2Q8IXS6 379 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 IQCKQ8N0W5 287 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 GPATCH11Q8N954 259 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 OR9A4Q8NGU2 314 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 ALKBH8Q96BT7 664 aaKnown RBP17.52■□□□□ 0.4
NUP50-207ENST00000424634 LRRC39Q96DD0 335 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 TM4SF19Q96DZ7 209 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 RUNDC3BQ96NL0 473 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 AGAP4Q96P64 663 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 PSMG3-AS1Q96PY0 264 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 PCBD2Q9H0N5 130 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 MKKSQ9NPJ1 570 aaPredicted RBP17.52■□□□□ 0.4
NUP50-207ENST00000424634 MAP10Q9P2G4 905 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 NTNG1Q9Y2I2 539 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 PSAT1Q9Y617 370 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 ICE1Q9Y2F5 2266 aa17.52■□□□□ 0.4
NUP50-207ENST00000424634 CCDC188H7C350 402 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 PRPF4O43172 522 aaKnown RBP eCLIP17.51■□□□□ 0.394e-7■■■■□ 23.9
NUP50-207ENST00000424634 COX6A1P12074 109 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 BCL6P41182 706 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 RPL21P46778 160 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 ARL4CP56559 192 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 RPS15AP62244 130 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 MRPS25P82663 173 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 PDAP1Q13442 181 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 FRG1Q14331 258 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 EIF2S3LQ2VIR3 472 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 FAAH2Q6GMR7 532 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 LCTLQ6UWM7 567 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 NDUFAF7Q7L592 441 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 C17orf64Q86WR6 236 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 ZC3H7AQ8IWR0 971 aaKnown RBP17.51■□□□□ 0.39
NUP50-207ENST00000424634 TM9SF4Q92544 642 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 PYCR2Q96C36 320 aa17.51■□□□□ 0.39
NUP50-207ENST00000424634 SNF8Q96H20 258 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms