RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 C3orf38Q5JPI3 329 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 CYB5D1Q6P9G0 228 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 MARCH9Q86YJ5 346 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PLD3Q8IV08 490 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 DNAJC22Q8N4W6 341 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 TBC1D19Q8N5T2 526 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 BMPERQ8N8U9 685 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 WDR36Q8NI36 951 aaKnown RBP16.81■□□□□ 0.28
LINC00271-201ENST00000421378 PPP1R14CQ8TAE6 165 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 CDK15Q96Q40 435 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 OR6C1Q96RD1 312 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 NTMT1Q9BV86 223 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 FGF21Q9NSA1 209 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 SATB2Q9UPW6 733 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 STK38LQ9Y2H1 464 aa16.81■□□□□ 0.28
LINC00271-201ENST00000421378 TRBC2A0A5B9 178 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 PPP6CO00743 305 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 HCRTR1O43613 425 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 H2AFYO75367 372 aaKnown RBP16.8■□□□□ 0.28
LINC00271-201ENST00000421378 CLDN9O95484 217 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 CCL4P13236 92 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 CD22P20273 847 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 CASP2P42575 452 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 LAPTM5Q13571 262 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 CHI3L2Q15782 390 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 LIPJQ5W064 366 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 FBXO42Q6P3S6 717 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 KRT78Q8N1N4 520 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 ZNF740Q8NDX6 193 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 CNDP1Q96KN2 507 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 ZNF382Q96SR6 550 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 TRMOQ9BU70 441 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 SARGQ9BW04 601 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 PITHD1Q9GZP4 211 aaPredicted RBP16.8■□□□□ 0.28
LINC00271-201ENST00000421378 PLCL2Q9UPR0 1127 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 KNTC1P50748 2209 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 KIF26BQ2KJY2 2108 aa16.8■□□□□ 0.28
LINC00271-201ENST00000421378 B4E171 279 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 TMEM150CB9EJG8 249 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 OR1F1O43749 312 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 CHN1P15882 459 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 ITIH1P19827 911 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 BCL6P41182 706 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 HNF4AP41235 474 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 TSPAN7P41732 249 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 GABRA4P48169 554 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 FRMPD2BQ6IN97 320 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 GRHL2Q6ISB3 625 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 FOXR1Q6PIV2 292 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 TMIGD1Q6UXZ0 262 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 MILR1Q7Z6M3 343 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 MCATQ8IVS2 390 aaKnown RBP16.79■□□□□ 0.28
LINC00271-201ENST00000421378 OR4F6Q8NGB9 312 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 RERGQ96A58 199 aaPredicted RBP16.79■□□□□ 0.28
LINC00271-201ENST00000421378 OR2A5Q96R48 311 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 DRC3Q9H069 523 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 PISDQ9UG56 409 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 RNF11Q9Y3C5 154 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 SPTBN2O15020 2390 aa16.79■□□□□ 0.28
LINC00271-201ENST00000421378 KCNE1BA0A087WTH5 132 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 A0A1B0GTL3 188 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 A0A1W2PNU3 283 aaPredicted RBP16.78■□□□□ 0.28
LINC00271-201ENST00000421378 NPHS1O60500 1241 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 SRPX2O60687 465 aaPredicted RBP16.78■□□□□ 0.28
LINC00271-201ENST00000421378 SERPINE1P05121 402 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 BGNP21810 368 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 SERPINB5P36952 375 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 MC2RQ01718 297 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 RCN2Q14257 317 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 IL11RAQ14626 422 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 RBBP5Q15291 538 aaKnown RBP16.78■□□□□ 0.28
LINC00271-201ENST00000421378 HIST2H2ACQ16777 129 aaPredicted RBP16.78■□□□□ 0.28
LINC00271-201ENST00000421378 GGTA1PQ4G0N0 100 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 HIST2H2AA3Q6FI13 130 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 LETMD1Q6P1Q0 360 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 GPRIN3Q6ZVF9 776 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 L3MBTL4Q8NA19 623 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 OR6Y1Q8NGX8 325 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 ZNF501Q96CX3 271 aaPredicted RBP16.78■□□□□ 0.28
LINC00271-201ENST00000421378 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 MAGEB10Q96LZ2 347 aaPredicted RBP16.78■□□□□ 0.28
LINC00271-201ENST00000421378 MID1IP1Q9NPA3 183 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 IRAK4Q9NWZ3 460 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 RARRES3Q9UL19 164 aa16.78■□□□□ 0.28
LINC00271-201ENST00000421378 LOC105369274A0A096LPK9 316 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 LOC102723532A0A0G2JNH3 316 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 PMS2P1A4D2B8 440 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 UBFD1O14562 309 aaKnown RBP16.77■□□□□ 0.28
LINC00271-201ENST00000421378 POLR1CO15160 346 aaPredicted RBP16.77■□□□□ 0.28
LINC00271-201ENST00000421378 LCMT2O60294 686 aaKnown RBP16.77■□□□□ 0.28
LINC00271-201ENST00000421378 ESRRBO95718 433 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 GRK2P25098 689 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 CCR10P46092 362 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 SCTRP47872 440 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 MAPK10P53779 464 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 PKNOX1P55347 436 aa16.77■□□□□ 0.28
LINC00271-201ENST00000421378 RAB15P59190 212 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms