RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PSMF1Q92530 271 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 COL26A1Q96A83 441 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 MIEF2Q96C03 454 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 C8orf44Q96CB5 159 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 CAPZA3Q96KX2 299 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 PRAP1Q96NZ9 151 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 OLFM1Q99784 485 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 NAT9Q9BTE0 207 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 CRB3Q9BUF7 120 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 SGPP1Q9BX95 441 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 TGIF2Q9GZN2 237 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 SLAMF7Q9NQ25 335 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 ABCF3Q9NUQ8 709 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 ASF1BQ9NVP2 202 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 TAS2R13Q9NYV9 303 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 IKZF3Q9UKT9 509 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 PYCARDQ9ULZ3 195 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 VPS4AQ9UN37 437 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 CHMP2BQ9UQN3 213 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 PCDHGA10Q9Y5H3 936 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 ZGRF1Q86YA3 2104 aa10.49□□□□□ -0.73
SSBP3-206ENST00000420121 KCNE1BA0A087WTH5 132 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 A0A0A6YYC8 382 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 IDSB3KWA1 339 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 I3L1I5 382 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 TTI1O43156 1089 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 SEMA7AO75326 666 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 IPO13O94829 963 aaKnown RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 KLHL18O94889 574 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 SEC31AO94979 1220 aaKnown RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 HPP00738 406 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 STATHP02808 62 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 ALPPP05187 535 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 C8GP07360 202 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 FDXRP22570 491 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 CSNK1G2P78368 415 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 OCA2Q04671 838 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 CBLBQ13191 982 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 SP140Q13342 867 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 FAM53BQ14153 422 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 FASTKD3Q14CZ7 662 aaKnown RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 HIF1AQ16665 826 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 LRRC8EQ6NSJ5 796 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 AGTRAPQ6RW13 159 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 TMEM207Q6UWW9 146 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 ZC3H7AQ8IWR0 971 aaKnown RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 KLHL7Q8IXQ5 586 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 IQCKQ8N0W5 287 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 PPP4R1Q8TF05 950 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 TM4SF19Q96DZ7 209 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 LINGO1Q96FE5 620 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 CCDC138Q96M89 665 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 LHPPQ9H008 270 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 DRC3Q9H069 523 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 ATG10Q9H0Y0 220 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 PARVBQ9HBI1 364 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 CCDC177Q9NQR7 707 aaPredicted RBP10.48□□□□□ -0.73
SSBP3-206ENST00000420121 TMEM184CQ9NVA4 438 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 TRPC4Q9UBN4 977 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 C3orf18Q9UK00 162 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 PSAT1Q9Y617 370 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 UNC79Q9P2D8 2635 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 SVILO95425 2214 aa10.48□□□□□ -0.73
SSBP3-206ENST00000420121 LOC102723996A0A087X1L8 192 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 BLACEA4D250 179 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 C2orf72A6NCS6 295 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 E7ESA3 106 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 SLC16A5O15375 505 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 LCMT2O60294 686 aaKnown RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 KLHL41O60662 606 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 CBX6O95503 412 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 CELA2AP08217 269 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 ACPPP15309 386 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 NPPBP16860 134 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 SOX11P35716 441 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 BCL6P41182 706 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 RGS4P49798 205 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 ITGA8P53708 1063 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 GNG11P61952 73 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 MAT1AQ00266 395 aaKnown RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 DR1Q01658 176 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 NAE1Q13564 534 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 FRG1Q14331 258 aaKnown RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 THEMIS2Q5TEJ8 643 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 HECTD2Q5U5R9 776 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 UGT3A1Q6NUS8 523 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 TMEM205Q6UW68 189 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 LCTLQ6UWM7 567 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 SYDE1Q6ZW31 735 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 ADCK2Q7Z695 626 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 PDIK1LQ8N165 341 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 ZADH2Q8N4Q0 377 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 CISD2Q8N5K1 135 aaKnown RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 MCOLN3Q8TDD5 553 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 MMABQ96EY8 250 aaPredicted RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 CFAP36Q96G28 342 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 THOC3Q96J01 351 aaKnown RBP10.47□□□□□ -0.73
SSBP3-206ENST00000420121 OR4K3Q96R72 315 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 MACROD1Q9BQ69 325 aa10.47□□□□□ -0.73
SSBP3-206ENST00000420121 WDR77Q9BQA1 342 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms