RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 H0YAE9 185 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 IDH3BO43837 385 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 KRT33AO76009 404 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 PENKP01210 267 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 F3P13726 295 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 CD59P13987 128 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 GATA1P15976 413 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 SELEP16581 610 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 EEF1B2P24534 225 aaKnown RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 HLA-FP30511 346 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 HSPA4P34932 840 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 GMPSP49915 693 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 MTCP1P56278 107 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 HUNKP57058 714 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 OR1D5P58170 312 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 IRX4P78413 519 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 CYCSP99999 105 aaKnown RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 TAB1Q15750 504 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 MOGAT2Q3SYC2 334 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 TAF1BQ53T94 588 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 CTR9Q6PD62 1173 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 SUSD1Q6UWL2 747 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 METTL7BQ6UX53 244 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 GPRIN3Q6ZVF9 776 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 MFN1Q8IWA4 741 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 FAM222BQ8WU58 562 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 TSACCQ96A04 125 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 OVOL2Q9BRP0 275 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 PYGO2Q9BRQ0 406 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 TRIM51Q9BSJ1 452 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 SLC25A23Q9BV35 468 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 LRRC61Q9BV99 259 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 PANK2Q9BZ23 570 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 DNAI2Q9GZS0 605 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 FAM49AQ9H0Q0 323 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 OR10A4Q9H209 315 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 RABEP2Q9H5N1 569 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 XAB2Q9HCS7 855 aaKnown RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 CHCHD3Q9NX63 227 aaKnown RBP3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 KLK13Q9UKR3 277 aa3.69□□□□□ -1.82
HMGB1P49-201ENST00000418882 IGHV3OR16-10A0A075B7F0 116 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 A0A1W2PPR1 153 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 KPNA7A9QM74 516 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 C17orf105B2RV13 164 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 ILF2Q12905 390 aaKnown RBP3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 SRSF9Q13242 221 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 ZNF273Q14593 569 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 OPCMLQ14982 345 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 FASTKD3Q14CZ7 662 aaKnown RBP3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 TAZQ16635 292 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 TCP11X2Q5H9J9 407 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 TCTEX1D4Q5JR98 221 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 TRIM65Q6PJ69 517 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 FRRS1Q6ZNA5 592 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 SLC24A5Q71RS6 500 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 CPEB2Q7Z5Q1 589 aaKnown RBP3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 CCDC89Q8N998 374 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 MIPOL1Q8TD10 442 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 PYCR2Q96C36 320 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 TDRD1Q9BXT4 1180 aaKnown RBP3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 NYXQ9GZU5 481 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 ACTL8Q9H568 366 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 MED20Q9H944 212 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 PRDM4Q9UKN5 801 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 IGSF1Q8N6C5 1336 aa3.68□□□□□ -1.82
HMGB1P49-201ENST00000418882 SHISA7A6NL88 538 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 RTCAO00442 366 aaKnown RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 TLX2O43763 284 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 PRAF2O60831 178 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 RECQL5O94762 991 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 ERCC2P18074 760 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 ACAT1P24752 427 aaKnown RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 ELAVL4P26378 380 aaKnown RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 KCTD2Q14681 263 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 FAM189A2Q15884 450 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 C1orf141Q5JVX7 400 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 CYB5D1Q6P9G0 228 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 FCRLAQ7L513 359 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 C5orf24Q7Z6I8 188 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 RCOR2Q8IZ40 523 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 Q8N377 158 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 RYBPQ8N488 228 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 NUP37Q8NFH4 326 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 ATP8B4Q8TF62 1192 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 METTL21AQ8WXB1 218 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 NEDD4LQ96PU5 975 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 CDCA3Q99618 268 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 UBXN6Q9BZV1 441 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 FN3KQ9H479 309 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 RPS10P5Q9NQ39 176 aa3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 TEX10Q9NXF1 929 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 THAP10Q9P2Z0 257 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P49-201ENST00000418882 CEACAM4O75871 244 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 TRIM49P0CI25 452 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 TRIM49CP0CI26 452 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 CAPN2P17655 700 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 SHC1P29353 583 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 CDC25CP30307 473 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 TSFMP43897 325 aaKnown RBP3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 DCDC1P59894 354 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms