RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 NDOR1Q9UHB4 597 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 PADI2Q9Y2J8 665 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 RELNP78509 3460 aa19.63■□□□□ 0.73
PKNOX1-202ENST00000418336 CTAGE15A4D2H0 777 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 MASP2O00187 686 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 SOCS6O14544 535 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 PHGDHO43175 533 aaKnown RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 HIST1H2AGP0C0S8 130 aaPredicted RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 CDH1P12830 882 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 CD1DP15813 335 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 HIST1H2ADP20671 130 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 SLC26A3P40879 764 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 SLC6A12P48065 614 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 ILF2Q12905 390 aaKnown RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 DLG1Q12959 904 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 C18orf21Q32NC0 220 aaPredicted RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 GARNL3Q5VVW2 1013 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 CAPN13Q6MZZ7 669 aaPredicted RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 PRMT9Q6P2P2 845 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 ZNF605Q86T29 641 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 CTAGE6Q86UF2 777 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 CDKL2Q92772 493 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 HIST1H2AHQ96KK5 128 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 HIST1H2AJQ99878 128 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 MACROD1Q9BQ69 325 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 H2AFJQ9BTM1 129 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 ZNF304Q9HCX3 659 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 NINJ2Q9NZG7 142 aa19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 GPN3Q9UHW5 284 aaPredicted RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 PCDHGA9Q9Y5G4 932 aaKnown RBP19.62■□□□□ 0.73
PKNOX1-202ENST00000418336 FEZF1A0PJY2 475 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 STATHP02808 62 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 CD63P08962 238 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 ATXN8OSP0DMR3 200 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 OTX2P32243 289 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 RPS15AP62244 130 aaKnown RBP19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 MUM1Q2TAK8 710 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 CATSPEREQ5SY80 951 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 GRTP1Q5TC63 336 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 PRSS41Q7RTY9 318 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 C17orf64Q86WR6 236 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 PTRH1Q86Y79 214 aaKnown RBP19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 NEIL2Q969S2 332 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 MVB12AQ96EY5 273 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 UNKQ9C0B0 810 aaKnown RBP19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 HS3ST3B1Q9Y662 390 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 TENM4Q6N022 2769 aa19.61■□□□□ 0.73
PKNOX1-202ENST00000418336 MKRN2OSH3BPM6 223 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 SLC35E2BP0CK96 405 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 MMP11P24347 488 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 STX2P32856 288 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 KCNC1P48547 511 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 DSG2Q14126 1118 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 USP10Q14694 798 aaKnown RBP19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 OR4D1Q15615 310 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 LACTB2Q53H82 288 aaPredicted RBP19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 TMEM214Q6NUQ4 689 aaKnown RBP19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 SHISA6Q6ZSJ9 500 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 MED25Q71SY5 747 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 ADCK2Q7Z695 626 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 CMC1Q7Z7K0 106 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 RAB43Q86YS6 212 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 PPM1NQ8N819 430 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 TMEM102Q8N9M5 508 aaPredicted RBP19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 ZNF740Q8NDX6 193 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 FDCSPQ8NFU4 85 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 ATL1Q8WXF7 558 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 NACC2Q96BF6 587 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 RHBDF1Q96CC6 855 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 THAP11Q96EK4 314 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 CABS1Q96KC9 395 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 TMEM79Q9BSE2 394 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 HAUS8Q9BT25 410 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 SOX17Q9H6I2 414 aaPredicted RBP19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 P4HTMQ9NXG6 502 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 CTNNAL1Q9UBT7 734 aa19.6■□□□□ 0.73
PKNOX1-202ENST00000418336 KIF2AO00139 706 aaPredicted RBP19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 TAPBPO15533 448 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 CTAGE8P0CG41 777 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 PIM1P11309 404 aaPredicted RBP19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 CCL11P51671 97 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 RAB10P61026 200 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 MEF2AQ02078 507 aaPredicted RBP19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 NAB1Q13506 487 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 FAM53BQ14153 422 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 TGFBIQ15582 683 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 VWA2Q5GFL6 755 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 DCAF10Q5QP82 559 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 ADAMTSL2Q86TH1 951 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 LAPTM4BQ86VI4 370 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 CTAGE4Q8IX94 777 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 CTAGE3PQ8IX95 158 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 MFSD9Q8NBP5 474 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 STT3BQ8TCJ2 826 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 ALKBH8Q96BT7 664 aaKnown RBP19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 NUDT9Q9BW91 350 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 TRIM54Q9BYV2 358 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 FAM129AQ9BZQ8 928 aa19.59■□□□□ 0.73
PKNOX1-202ENST00000418336 A0A0A6YYC8 382 aaPredicted RBP19.58■□□□□ 0.72
PKNOX1-202ENST00000418336 I3L1I5 382 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms