RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 RDH12Q96NR8 316 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 DACH2Q96NX9 599 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ZNF347Q96SE7 839 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CORO1BQ9BR76 489 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TRIT1Q9H3H1 467 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TRIM39Q9HCM9 518 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TBCCD1Q9NVR7 557 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 RLIMQ9NVW2 624 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 J3KTA2 159 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PCDH7O60245 1069 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 KDM1AO60341 852 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ANXA4P09525 319 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ETFAP13804 333 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PORP16435 677 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ITIH1P19827 911 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CYP2A7P20853 494 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PSMA3P25788 255 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SOAT1P35610 550 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CD97P48960 835 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 MADCAM1Q13477 382 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CAMK2GQ13555 558 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 GPR33Q49SQ1 333 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 LRIF1Q5T3J3 769 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 C22orf39Q6P5X5 142 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TMEM25Q86YD3 366 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 NAGSQ8N159 534 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SETD9Q8NE22 299 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ZHX1-C8orf76Q96EF9 292 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CMTM7Q96FZ5 175 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 APOL4Q9BPW4 351 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ACAT2Q9BWD1 397 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SLC29A3Q9BZD2 475 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 RAD18Q9NS91 495 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 VPS29Q9UBQ0 182 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ITM2BQ9Y287 266 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PMF1-BGLAPU3KQ54 211 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 MGAT4DA6NG13 374 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 URODP06132 367 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ATP1B2P14415 290 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 DNAJA1P31689 397 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 CDH12P55289 794 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SLC35A2P78381 396 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SCN5AQ14524 2016 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 COX20Q5RI15 118 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 LHX8Q68G74 356 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ANKRD13BQ86YJ7 626 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 GTPBP3Q969Y2 492 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SCRN2Q96FV2 425 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SRRDQ9UH36 339 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 PAIP2BQ9ULR5 123 aaKnown RBP11.5□□□□□ -0.57
LIMK1-202ENST00000418310 SLC6A14Q9UN76 642 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 MAP4K5Q9Y4K4 846 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
LIMK1-202ENST00000418310 ARHGEF33A8MVX0 844 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 TSPAN6O43657 245 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 GREM1O60565 184 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 FPR1P21462 350 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 MAPK1P28482 360 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 PDHA2P29803 388 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 CTSCP53634 463 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 GABARAPL2P60520 117 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 PFN3P60673 137 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 MAD2L1BPQ15013 274 aaPredicted RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 ASTLQ6HA08 431 aaPredicted RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 OTOP2Q7RTS6 562 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 HSD11B1LQ7Z5J1 315 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 THOC6Q86W42 341 aaKnown RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 NRTNQ99748 197 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 RIOK2Q9BVS4 552 aaKnown RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 SLC12A9Q9BXP2 914 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 KLHL25Q9H0H3 589 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 ELAC1Q9H777 363 aaKnown RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 HCFC1R1Q9NWW0 138 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 KCNE1BA0A087WTH5 132 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 GABRR3A8MPY1 467 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 FAM227AF5H4B4 570 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 SLC16A6O15403 523 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 TBX1O43435 398 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 SLC16A8O95907 504 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 TGFB1P01137 390 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 CCDC159P0C7I6 412 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 IMPDH2P12268 514 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 WNT3P56703 355 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 NPRL3Q12980 569 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 DGUOKQ16854 277 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.49□□□□□ -0.57
LIMK1-202ENST00000418310 LRRC70Q7Z2Q7 622 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 SLC22A16Q86VW1 577 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 SYTL1Q8IYJ3 562 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 OR9Q2Q8NGE9 314 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 OR4A15Q8NGL6 344 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 LGALS12Q96DT0 336 aa11.49□□□□□ -0.57
LIMK1-202ENST00000418310 FEVQ99581 238 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms