RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 STX3Q13277 289 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 RBBP5Q15291 538 aaKnown RBP13.15□□□□□ -0.3
PHTF2-204ENST00000415251 GPR19Q15760 415 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 TCHHL1Q5QJ38 904 aaPredicted RBP13.15□□□□□ -0.3
PHTF2-204ENST00000415251 RNF175Q8N4F7 328 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 ANKRD53Q8N9V6 530 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 AGAP11Q8TF27 550 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
PHTF2-204ENST00000415251 MTFMTQ96DP5 389 aaKnown RBP13.15□□□□□ -0.3
PHTF2-204ENST00000415251 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 DRC3Q9H069 523 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 PDE7BQ9NP56 450 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 TIMM22Q9Y584 194 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 KLK4Q9Y5K2 254 aa13.15□□□□□ -0.3
PHTF2-204ENST00000415251 A0A1W2PNU3 283 aaPredicted RBP13.14□□□□□ -0.31
PHTF2-204ENST00000415251 TOX3O15405 576 aaPredicted RBP13.14□□□□□ -0.31
PHTF2-204ENST00000415251 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
PHTF2-204ENST00000415251 NPHS1O60500 1241 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 FKBP9O95302 570 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 MLYCDO95822 493 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 OTCP00480 354 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 CDK4P11802 303 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 CCL4P13236 92 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 SDHBP21912 280 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 CCKBRP32239 447 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 BCL6P41182 706 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 CASP2P42575 452 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 GABRA4P48169 554 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 SLC1A6P48664 564 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 NEK2P51955 445 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 ABCE1P61221 599 aaKnown RBP13.14□□□□□ -0.31
PHTF2-204ENST00000415251 PCDH1Q08174 1060 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 TARDBPQ13148 414 aaKnown RBP eCLIP13.14□□□□□ -0.31
PHTF2-204ENST00000415251 RCN2Q14257 317 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 GPRIN3Q6ZVF9 776 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 D2HGDHQ8N465 521 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 DNAJC22Q8N4W6 341 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 L3MBTL4Q8NA19 623 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 ADAMTS14Q8WXS8 1223 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 PTCD3Q96EY7 689 aaKnown RBP13.14□□□□□ -0.31
PHTF2-204ENST00000415251 TMEM74Q96NL1 305 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 OR2A5Q96R48 311 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 ZNF382Q96SR6 550 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 PELI2Q9HAT8 420 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 ZDHHC2Q9UIJ5 367 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 BTRCQ9Y297 605 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
PHTF2-204ENST00000415251 KCNE1BA0A087WTH5 132 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 H2AFYO75367 372 aaKnown RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 ESRRBO95718 433 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CAPN1P07384 714 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 HRH2P25021 359 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 MLLT3P42568 568 aaPredicted RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 E2F2Q14209 437 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 TBCCQ15814 346 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 PRAMEF17Q5VTA0 474 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 LIPJQ5W064 366 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CLEC6AQ6EIG7 209 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 TMIGD1Q6UXZ0 262 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CUZD1Q86UP6 607 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 ARFGAP2Q8N6H7 521 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CKAP2Q8WWK9 683 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SORT1Q99523 831 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 EHD1Q9H4M9 534 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 APMAPQ9HDC9 416 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SLCO1B3Q9NPD5 702 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 FARSBQ9NSD9 589 aaKnown RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SCN3AQ9NY46 2000 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CELSR3Q9NYQ7 3312 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 POLR3GO15318 223 aaPredicted RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SH3BGRLO75368 114 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 EIF2S1P05198 315 aaKnown RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 ITIH1P19827 911 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 GRK2P25098 689 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 GRK3P35626 688 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 VSX2P58304 361 aaPredicted RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SNRPNP63162 240 aaKnown RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 CYP4F2P78329 520 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 REEP5Q00765 189 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 FOXM1Q08050 763 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 TRA2AQ13595 282 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 ZRSR2Q15696 482 aaKnown RBP13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 FOXR1Q6PIV2 292 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 SCIMPQ6UWF3 145 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 RNF44Q7L0R7 432 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 VN1R4Q7Z5H5 301 aa13.13□□□□□ -0.31
PHTF2-204ENST00000415251 KMT5CQ86Y97 462 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms