RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 NEIL2Q969S2 332 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 FKBP10Q96AY3 582 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 SCYL1Q96KG9 808 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 CATSPER2Q96P56 530 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 OR2A5Q96R48 311 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 OR4K3Q96R72 315 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 MRPL46Q9H2W6 279 aaKnown RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 CUTCQ9NTM9 273 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 OPTCQ9UBM4 332 aa14□□□□□ -0.17
LIMS1-206ENST00000414829 GPN3Q9UHW5 284 aaPredicted RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 NXT1Q9UKK6 140 aaKnown RBP14□□□□□ -0.17
LIMS1-206ENST00000414829 KIF26BQ2KJY2 2108 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 URADA6NGE7 173 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 H0YGG7 62 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 K7EPI3 171 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 EIF2S1P05198 315 aaKnown RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 LIFP15018 202 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 TCN2P20062 427 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 TAC1P20366 129 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 ITPKBP27987 946 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 GCAP28676 217 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 AHRP35869 848 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 GLRBP48167 497 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 ARF3P61204 181 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 REEP5Q00765 189 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 RGS1Q08116 209 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 GPS2Q13227 327 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 LAPTM5Q13571 262 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 DNASE1L3Q13609 305 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 NAA30Q147X3 362 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 PRTGQ2VWP7 1150 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 TECRLQ5HYJ1 363 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 NXPE4Q6UWF7 544 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 GPR155Q7Z3F1 870 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 CROCCP2Q86T23 111 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 VASH2Q86V25 355 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 OR4K1Q8NGD4 311 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 CT55Q8WUE5 264 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 STARD8Q92502 1023 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 UBE2E3Q969T4 207 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 TMEM79Q9BSE2 394 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 EFCAB11Q9BUY7 163 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 CD244Q9BZW8 370 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 ROPN1BQ9BZX4 212 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 SPRTNQ9H040 489 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 ROPN1Q9HAT0 212 aaPredicted RBP13.99□□□□□ -0.17
LIMS1-206ENST00000414829 XPR1Q9UBH6 696 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 NDOR1Q9UHB4 597 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 ANGPTL3Q9Y5C1 460 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 PCDHGA4Q9Y5G9 962 aa13.99□□□□□ -0.17
LIMS1-206ENST00000414829 URB1O60287 2271 aaKnown RBP13.98□□□□□ -0.17
LIMS1-206ENST00000414829 MAP1BP46821 2468 aaKnown RBP13.98□□□□□ -0.17
LIMS1-206ENST00000414829 TEX51A0A1B0GUA7 166 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 HYKKA2RU49 373 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 STX16-NPEPL1H3BU86 382 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 UBXN8O00124 270 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 STX16O14662 325 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 KLK8O60259 260 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 CCNT2O60583 730 aaKnown RBP13.98□□□□□ -0.17
LIMS1-206ENST00000414829 GLRA3O75311 464 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 RFPL1O75677 317 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 SERPINB1P30740 379 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 HSPA7P48741 367 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 CXADRP78310 365 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 PWP1Q13610 501 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 FAM53BQ14153 422 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 SETDB1Q15047 1291 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 NCF4Q15080 339 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 NKAIN1Q4KMZ8 207 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 ATG9BQ674R7 924 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 FRMPD2BQ6IN97 320 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 FBXO42Q6P3S6 717 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 TTLL10Q6ZVT0 673 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 SYVN1Q86TM6 617 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 ASPGQ86U10 573 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 MFSD9Q8NBP5 474 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 TRPV3Q8NET8 790 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 GPR78Q96P69 363 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 GBP5Q96PP8 586 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 DRC3Q9H069 523 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 CHST8Q9H2A9 424 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 IFT80Q9P2H3 777 aaPredicted RBP13.98□□□□□ -0.17
LIMS1-206ENST00000414829 TBK1Q9UHD2 729 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 ADAMTS20P59510 1910 aa13.98□□□□□ -0.17
LIMS1-206ENST00000414829 LOC105369274A0A096LPK9 316 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 LOC102723532A0A0G2JNH3 316 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 LOC101059948A0A1B0GTJ6 334 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 EFSO43281 561 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 HCRTR1O43613 425 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 OR1F1O43749 312 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 ALBP02768 609 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 SHBGP04278 402 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 C1GALT1C1LP0DN25 315 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 EPB42P16452 691 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 ITGAXP20702 1163 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 ALAS2P22557 587 aa13.97□□□□□ -0.17
LIMS1-206ENST00000414829 PTPN4P29074 926 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms