RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KMT2BQ9UMN6 2715 aaPredicted RBP14.05□□□□□ -0.16
CHD1-202ENST00000414220 WDFY3Q8IZQ1 3526 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 CLGNO14967 610 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 RIPK2O43353 540 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 SLU7O95391 586 aaKnown RBP14.04□□□□□ -0.16
CHD1-202ENST00000414220 IGHEP01854 428 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 SLC35G6P0C7Q6 338 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 TFEBP19484 476 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 AVPR1BP47901 424 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 SKP1P63208 163 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 SSPNQ14714 243 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 TBR1Q16650 682 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 UGT8Q16880 541 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 DEFB109BQ30KR1 87 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 ZNF385CQ66K41 422 aaPredicted RBP14.04□□□□□ -0.16
CHD1-202ENST00000414220 ABHD11Q8NFV4 315 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 RHEBL1Q8TAI7 183 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 UHMK1Q8TAS1 419 aaKnown RBP14.04□□□□□ -0.16
CHD1-202ENST00000414220 TTC9Q92623 222 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 EXTL1Q92935 676 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 PTERQ96BW5 349 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 MTBPQ96DY7 904 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 VPS11Q9H270 941 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 ALG9Q9H6U8 611 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 GPRC5BQ9NZH0 403 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 IKZF3Q9UKT9 509 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 G3BP2Q9UN86 482 aaKnown RBP14.04□□□□□ -0.16
CHD1-202ENST00000414220 MAN2B2Q9Y2E5 1009 aa14.04□□□□□ -0.16
CHD1-202ENST00000414220 PTRH2Q9Y3E5 179 aaKnown RBP14.04□□□□□ -0.16
CHD1-202ENST00000414220 IQANK1A0A1B0GTG1 560 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 TRBC2A0A5B9 178 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 URADA6NGE7 173 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 PEX12O00623 359 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 OR1F1O43749 312 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 KERAO60938 352 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 SUPT3HO75486 399 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 STK16O75716 305 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 KLHL2O95198 593 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 CTSBP07858 339 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 SNRPAP09012 282 aaKnown RBP14.03□□□□□ -0.16
CHD1-202ENST00000414220 TNFRSF8P28908 595 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 RGS1Q08116 209 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 FAM53BQ14153 422 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 TSNAXIP1Q2TAA8 658 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 PRTGQ2VWP7 1150 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 NIPAL1Q6NVV3 410 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 NXPE4Q6UWF7 544 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 FAM198BQ6UWH4 519 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 OVCH1Q7RTY7 1134 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 ASPGQ86U10 573 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 PLD3Q8IV08 490 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 KRT78Q8N1N4 520 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 MFSD9Q8NBP5 474 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 PDPRQ8NCN5 879 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 OR4K1Q8NGD4 311 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 SLC13A3Q8WWT9 602 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 EXT2Q93063 718 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 NEIL2Q969S2 332 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 NXNL1Q96CM4 212 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 YIPF2Q9BWQ6 316 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 DRC3Q9H069 523 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 ADNPQ9H2P0 1102 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 WDR54Q9H977 334 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 DNAJC11Q9NVH1 559 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 RUVBL1Q9Y265 456 aaKnown RBP14.03□□□□□ -0.16
CHD1-202ENST00000414220 PTPRQQ9UMZ3 2332 aa14.03□□□□□ -0.16
CHD1-202ENST00000414220 ONECUT2O95948 504 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 RBP1P09455 135 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 COL6A2P12110 1019 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 FBLP22087 321 aaKnown RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 HPDP32754 393 aaPredicted RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 GGT5P36269 586 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 GCGRP47871 477 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 OR1D4P47884 311 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 RRADP55042 308 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 RPS18P62269 152 aaKnown RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 CDC16Q13042 620 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 SLC9A5Q14940 896 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 OR4D1Q15615 310 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 HIST2H2ACQ16777 129 aaPredicted RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 HKDC1Q2TB90 917 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 HIST2H2AA3Q6FI13 130 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 LCN10Q6JVE6 187 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 TMPRSS11BQ86T26 416 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 KLHDC8AQ8IYD2 350 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 SNX31Q8N9S9 440 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 TRPV3Q8NET8 790 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 TTLQ8NG68 377 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 OR2Y1Q8NGV0 311 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 KCTD4Q8WVF5 259 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 UBLCP1Q8WVY7 318 aaPredicted RBP14.02□□□□□ -0.17
CHD1-202ENST00000414220 NACC2Q96BF6 587 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 OR4K3Q96R72 315 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 RUFY1Q96T51 708 aa14.02□□□□□ -0.17
CHD1-202ENST00000414220 SARGQ9BW04 601 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms