RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 A0A1W2PPW3 197 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 AHRRA9YTQ3 701 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 E9PI62 339 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 H0Y8G0 127 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ECI1P42126 302 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 MAGEA3P43357 314 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CDH15P55291 814 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ITGADQ13349 1161 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 AARS2Q5JTZ9 985 aaKnown RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 C10orf120Q5SQS8 335 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 GPR107Q5VW38 600 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SCYL2Q6P3W7 929 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CASC4Q6P4E1 433 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF813Q6ZN06 617 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PRR23CQ6ZRP0 262 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 MSANTD1Q6ZTZ1 278 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 DEFB106AQ8N104 65 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF786Q8N393 782 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 POC5Q8NA72 575 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 NFKBIDQ8NI38 313 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CPT1CQ8TCG5 803 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 DNAJA4Q8WW22 397 aaPredicted RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 TAMM41Q96BW9 452 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PERPQ96FX8 193 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 HMCESQ96FZ2 354 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SIGLEC10Q96LC7 697 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF641Q96N77 438 aaPredicted RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SEMA3CQ99985 751 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 HTATIP2Q9BUP3 242 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 MROQ9BYG7 248 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 RNF32Q9H0A6 362 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ILKAPQ9H0C8 392 aaPredicted RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CHODLQ9H9P2 273 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CSNK1G1Q9HCP0 422 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 CD320Q9NPF0 282 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 FARSBQ9NSD9 589 aaKnown RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 GIMAP4Q9NUV9 329 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 SPG21Q9NZD8 308 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 PKD2L2Q9NZM6 624 aa9.11□□□□□ -0.95
SNHG3-201ENST00000413987 AFF4Q9UHB7 1163 aaKnown RBP9.11□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 GLOD5A6NK44 160 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF839A8K0R7 811 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 FAM47E-STBD1D6RA91 191 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 RHBDL1O75783 438 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 VAPBO95292 243 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 SEC24AO95486 1093 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 BCL10O95999 233 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CSTAP01040 98 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ADH1AP07327 375 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ANXA2P07355 339 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CA3P07451 260 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 APRTP07741 180 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 BMP2P12643 396 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 TPSB2P20231 275 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 GPD1P21695 349 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 HNRNPA2B1P22626 353 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 AHCYP23526 432 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 MIPP30301 263 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CBX5P45973 191 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 RPL34P49207 117 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 HNRNPFP52597 415 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 DAOAP59103 153 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 RPS16P62249 146 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 POLR2GP62487 172 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 NME3Q13232 169 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF177Q13360 481 aaPredicted RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF846Q147U1 533 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 OXA1LQ15070 435 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 TPSAB1Q15661 275 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 NTRK2Q16620 822 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 PHKG1Q16816 387 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 WIPI1Q5MNZ9 446 aaPredicted RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 OTUD1Q5VV17 481 aaPredicted RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 MBNL2Q5VZF2 373 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 TRMT10BQ6PF06 316 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ADAMTSL4Q6UY14 1074 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CAMK1DQ8IU85 385 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 UNC5BQ8IZJ1 945 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ZNF781Q8N8C0 355 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 OR2T34Q8NGX1 318 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 SNX22Q96L94 193 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 HSFY1Q96LI6 401 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 SAMD8Q96LT4 415 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CCDC140Q96MF4 163 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CTRCQ99895 268 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 PIMREGQ9BSJ6 248 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 CALN1Q9BXU9 219 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 NTN4Q9HB63 628 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 MBNL1Q9NR56 388 aaKnown RBP9.1□□□□□ -0.95
SNHG3-201ENST00000413987 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 SATB2Q9UPW6 733 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 ERVK-11Q9UQG0 969 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 INSL6Q9Y581 213 aa9.1□□□□□ -0.95
SNHG3-201ENST00000413987 GBF1Q92538 1859 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 COL6A3P12111 3177 aa9.09□□□□□ -0.95
SNHG3-201ENST00000413987 BCLAF3A2AJT9 711 aaKnown RBP9.09□□□□□ -0.95
SNHG3-201ENST00000413987 FAM170BA6NMN3 283 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms