RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZDHHC2Q9UIJ5 367 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
PHRF1-202ENST00000413872 ADGRE1Q14246 886 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 ZNF678Q5SXM1 525 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 AHSA2Q719I0 299 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 POC5Q8NA72 575 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 TSPEARQ8WU66 669 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 SCAMP4Q969E2 229 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 PIAS3Q9Y6X2 628 aa16.77■□□□□ 0.28
PHRF1-202ENST00000413872 A0A1W2PP18 115 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 JMJD7P0C870 316 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 GDF5P43026 501 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 ATP4BP51164 291 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 RAB8AP61006 207 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 PITX1P78337 314 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-202ENST00000413872 CST6Q15828 149 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 FAM110BQ8TC76 370 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 MED31Q9Y3C7 131 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 PCDHB3Q9Y5E6 796 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 PCDHGB1Q9Y5G3 927 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 GPC6Q9Y625 555 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-202ENST00000413872 A8MU76 341 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 A8MUA0 341 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 IFNA6P05013 189 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM198Q66K66 360 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 BTN2A1Q7KYR7 527 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 ZNF483Q8TF39 744 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-202ENST00000413872 SMPDL3BQ92485 455 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 KAT2AQ92830 837 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-202ENST00000413872 PDE10AQ9Y233 779 aa16.77■□□□□ 0.27
PHRF1-202ENST00000413872 PGRP06401 933 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 DNAJA1P31689 397 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 KLHL26Q53HC5 615 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 EMC10Q5UCC4 262 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 TMCO2Q7Z6W1 182 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM126BQ8IUX1 230 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 OR10G2Q8NGC3 310 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 CRELD1Q96HD1 420 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 KCNH6Q9H252 994 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 ABCB10Q9NRK6 738 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 NAV1Q8NEY1 1877 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 SOX30O94993 753 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 CA3P07451 260 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 PLGLB1Q02325 96 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 NDUFA5Q16718 116 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 CRB2Q5IJ48 1285 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 EPGNQ6UW88 154 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 OR51B5Q9H339 312 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.76■□□□□ 0.273e-8■■■■■ 33.2
PHRF1-202ENST00000413872 OARD1Q9Y530 152 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 ALS2Q96Q42 1657 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 TRMUO75648 421 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 RCBTB2O95199 551 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 PLGP00747 810 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 H1F0P07305 194 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 TYRP1P17643 537 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 POLR2CP19387 275 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 ACVR2AP27037 513 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 HMGCLP35914 325 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 RASGEF1BQ0VAM2 473 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 OLIG2Q13516 323 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 NCEH1Q6PIU2 408 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 ZNF433Q8N7K0 673 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 PSMA8Q8TAA3 256 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 IPCEF1Q8WWN9 437 aaPredicted RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 PELOQ9BRX2 385 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 CD320Q9NPF0 282 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 CYTH4Q9UIA0 394 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 RNF11Q9Y3C5 154 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 JUNP05412 331 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 CCT3P49368 545 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 BICRALQ6AI39 1079 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 TMEM214Q6NUQ4 689 aaKnown RBP16.76■□□□□ 0.27
PHRF1-202ENST00000413872 C1QTNF1Q9BXJ1 281 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 C11orf16Q9NQ32 467 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 PRODH2Q9UF12 536 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 UBR2Q8IWV8 1755 aa16.76■□□□□ 0.27
PHRF1-202ENST00000413872 ARHGEF33A8MVX0 844 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 SERPINA3P01011 423 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 C1GALT1C1LP0DN25 315 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 ACADLP28330 430 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 TICAM1Q8IUC6 712 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 GPR174Q9BXC1 333 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 EIF3FO00303 357 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-202ENST00000413872 DUX1O43812 170 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 B4GALT2O60909 372 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 ENDOUP21128 410 aaKnown RBP16.75■□□□□ 0.27
PHRF1-202ENST00000413872 BCAP31P51572 246 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 UBAP2Q5T6F2 1119 aaKnown RBP16.75■□□□□ 0.27
PHRF1-202ENST00000413872 SCML4Q8N228 414 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 PACRGLQ8N7B6 248 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 Q8N9G6 341 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-202ENST00000413872 PDPRQ8NCN5 879 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 OR52B2Q96RD2 323 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 TVP23BQ9NYZ1 205 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 SSNA1O43805 119 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 ZBTB11O95625 1053 aaPredicted RBP16.75■□□□□ 0.27
PHRF1-202ENST00000413872 ST3GAL3Q11203 375 aa16.75■□□□□ 0.27
PHRF1-202ENST00000413872 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms