RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 STARD5Q9NSY2 213 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 FOXJ2Q9P0K8 574 aa29.28■■■□□ 2.28
CSNK1E-206ENST00000413574 PPP6CO00743 305 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 OR7A17O14581 309 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 SUPT7LO94864 414 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 STATHP02808 62 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 FGF5P12034 268 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 CD22P20273 847 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 BCL6P41182 706 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 VSX2P58304 361 aaPredicted RBP29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 CHIT1Q13231 466 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 DCAF12Q5T6F0 453 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 METTL2BQ6P1Q9 378 aaKnown RBP29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 PPP1R3BQ86XI6 285 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 OR2A5Q96R48 311 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 SELENOSQ9BQE4 189 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 GEMIN8Q9NWZ8 242 aaKnown RBP29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 RBMS1P29558 406 aaKnown RBP29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 ALDH3A1P30838 453 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 RAB15P59190 212 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 IRF8Q02556 426 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 PWWP2BQ6NUJ5 590 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 CCNYL1Q8N7R7 359 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 GOLGA6L1Q8N7Z2 621 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 OR52B6Q8NGF0 335 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 CCDC126Q96EE4 140 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 L3HYPDHQ96EM0 354 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 CDK15Q96Q40 435 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 MLXIPLQ9NP71 852 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 ASCL3Q9NQ33 180 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 MID2Q9UJV3 735 aa29.27■■■□□ 2.28
CSNK1E-206ENST00000413574 H0YGG7 62 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 H3BMH7 237 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 OR1F1O43749 312 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 EIF2S1P05198 315 aaKnown RBP29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 GRK3P35626 688 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 ARF3P61204 181 aaPredicted RBP29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 REEP5Q00765 189 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 SLBPQ14493 270 aaKnown RBP eCLIP29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 CEACAM20Q6UY09 585 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 ANKRD42Q8N9B4 389 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 PPP4R1Q8TF05 950 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 NXPE2Q96DL1 559 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 AIF1LQ9BQI0 150 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 IRAK4Q9NWZ3 460 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 SERTAD3Q9UJW9 196 aa29.26■■■□□ 2.27
CSNK1E-206ENST00000413574 A0A1B0GTL3 188 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 TMEM120BA0PK00 339 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 KATNA1O75449 491 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 OR2B3O76000 313 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 WFS1O76024 890 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 ZNF28P17035 718 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 NAGLUP54802 743 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 ITGA1P56199 1179 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 RELAQ04206 551 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 PKNOX2Q96KN3 472 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 DDA1Q9BW61 102 aa29.25■■■□□ 2.27
CSNK1E-206ENST00000413574 TM9SF1O15321 606 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 PIK3CGP48736 1102 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 DNAJB13P59910 316 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 RPS15AP62244 130 aaKnown RBP29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 CLCQ05315 142 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 WASHC2DQ5SRD0 308 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 LIPMQ5VYY2 423 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 FAM219BQ5XKK7 198 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 TRPC4APQ8TEL6 797 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 WDR34Q96EX3 536 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 PTCD3Q96EY7 689 aaKnown RBP29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 MACROD1Q9BQ69 325 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 EHD1Q9H4M9 534 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 PCDHGA4Q9Y5G9 962 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 PCDHGA3Q9Y5H0 932 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 CELSR3Q9NYQ7 3312 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 SDK2Q58EX2 2172 aa29.24■■■□□ 2.27
CSNK1E-206ENST00000413574 TRBC2A0A5B9 178 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 CDRT15L2A8MXV6 281 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 H2AFYO75367 372 aaKnown RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ZWINTO95229 277 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 SLC5A2P31639 672 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ARL1P40616 181 aaPredicted RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 RBBP5Q15291 538 aaKnown RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 RBBP7Q16576 425 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 TMEM164Q5U3C3 297 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 VN1R4Q7Z5H5 301 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 MYLK4Q86YV6 388 aaPredicted RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ANKRD53Q8N9V6 530 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ATP6V1E2Q96A05 226 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ASPSCR1Q9BZE9 553 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 GSTO2Q9H4Y5 243 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ACTR8Q9H981 624 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 RNF11Q9Y3C5 154 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 SRPX2O60687 465 aaPredicted RBP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 CASP2P42575 452 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 CCR10P46092 362 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 TBCCQ15814 346 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 LARP7Q4G0J3 582 aaKnown RBP eCLIP29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 ADNP2Q6IQ32 1131 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 CYB5D1Q6P9G0 228 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 IGF2-ASQ6U949 168 aa29.23■■■□□ 2.27
CSNK1E-206ENST00000413574 TMEM126BQ8IUX1 230 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms