RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NSL1Q96IY1 281 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 FCRL1Q96LA6 429 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PRAP1Q96NZ9 151 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 OR2A14Q96R47 310 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 AIF1LQ9BQI0 150 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 TUBB6Q9BUF5 446 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PITHD1Q9GZP4 211 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 LRMDAQ9H2I8 198 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 NT5DC2Q9H857 520 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 UCK1Q9HA47 277 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 DMRT3Q9NQL9 472 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 SDR39U1Q9NRG7 319 aaPredicted RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 WDR70Q9NW82 654 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 C1orf109Q9NX04 203 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 NOP53Q9NZM5 478 aaKnown RBP6.39□□□□□ -1.39
VPS41-204ENST00000413141 PPT2Q9UMR5 302 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 TMED5Q9Y3A6 229 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 PCDHGA2Q9Y5H1 932 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 GPR45Q9Y5Y3 372 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 CSNK1G3Q9Y6M4 447 aa6.39□□□□□ -1.39
VPS41-204ENST00000413141 NCOR1O75376 2440 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 TTC28Q96AY4 2481 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 A0A1B0GTQ1 180 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 TRBC2A0A5B9 178 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 FEZF1A0PJY2 475 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 GSAPA4D1B5 854 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 FAM86C2PA6NEL3 165 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 OR5K3A6NET4 321 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 C2orf74A8MZ97 194 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ANKRD65E5RJM6 399 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 HAT1O14929 419 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ANKRD28O15084 1053 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 PPM1DO15297 605 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SEC22BO75396 215 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 DNAJC8O75937 253 aaPredicted RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 CFIP05156 583 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 GIMD1P0DJR0 217 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 G6PDP11413 515 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 COX4I1P13073 169 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 HOXB3P14651 431 aaPredicted RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 AMD1P17707 334 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 POLR2CP19387 275 aaPredicted RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 JAK1P23458 1154 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 HRH2P25021 359 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 CXCR2P25025 360 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 MAPK1P28482 360 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 BCL6P41182 706 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 GRIA3P42263 894 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 CAPZBP47756 277 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 NME5P56597 212 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 RPS13P62277 151 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 CYP4F2P78329 520 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 TBL3Q12788 808 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 BNIP3Q12983 259 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SIM2Q14190 667 aaPredicted RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 RBBP5Q15291 538 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 MAPRE2Q15555 327 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SF1Q15637 639 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 SLC5A12Q1EHB4 618 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 DUOXA1Q1HG43 343 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 AGKQ53H12 422 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SPIN4Q56A73 249 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 IL23RQ5VWK5 629 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 KIAA1614Q5VZ46 1190 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 OGFOD3Q6PK18 319 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 PAOXQ6QHF9 649 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 CYP20A1Q6UW02 462 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SPESP1Q6UW49 350 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ASRGL1Q7L266 308 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 KANSL1Q7Z3B3 1105 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ADCK2Q7Z695 626 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 TRIM73Q86UV7 250 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 PAQR7Q86WK9 346 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 OOSP2Q86WS3 158 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 PARP9Q8IXQ6 854 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SLC25A45Q8N413 288 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 LIX1Q8N485 282 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ARL10Q8N8L6 244 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ANKRD53Q8N9V6 530 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 RP9Q8TA86 221 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 CEP76Q8TAP6 659 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 RSC1A1Q92681 617 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 C11orf24Q96F05 449 aaPredicted RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 METTL2AQ96IZ6 378 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 SLC45A3Q96JT2 553 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 DPH7Q9BTV6 452 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 SARGQ9BW04 601 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 TBC1D10AQ9BXI6 508 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 MRPL1Q9BYD6 325 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 RHBGQ9H310 441 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ACTL8Q9H568 366 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 C11orf16Q9NQ32 467 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 FSCN3Q9NQT6 498 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 TMEM184CQ9NVA4 438 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 EVA1BQ9NVM1 165 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ACTR10Q9NZ32 417 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ZIM2Q9NZV7 527 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 CCDC167Q9P0B6 97 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms