RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 FFAR3O14843 346 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 GPR42O15529 346 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 C2P06681 752 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZDHHC11BP0C7U3 371 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 HGFP14210 728 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PKMP14618 531 aaKnown RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SYN1P17600 705 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ARFIP1P53367 373 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 LIMK2P53671 638 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SLC16A1P53985 500 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 AP1S1P61966 158 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 IL10RBQ08334 325 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 GPM6BQ13491 265 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PWP1Q13610 501 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PAN3Q58A45 887 aaKnown RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TMEM132CQ8N3T6 1108 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZBTB44Q8NCP5 570 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SPATA22Q8NHS9 363 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 LHFPL5Q8TAF8 219 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TRIB2Q92519 343 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SLX1AQ9BQ83 275 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TMEM175Q9BSA9 504 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 C16orf70Q9BSU1 422 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 CHIAQ9BZP6 476 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SMURF1Q9HCE7 757 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 IL1RAPQ9NPH3 570 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 KLHL1Q9NR64 748 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 CHRAC1Q9NRG0 131 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PHPT1Q9NRX4 125 aaPredicted RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 PCDHGC4Q9Y5F7 938 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 GLYATL1P3A0A0U1RQE8 302 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TSTD3H0UI37 97 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 CDK14O94921 469 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 HPRP00739 348 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ATP6AP1Q15904 470 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZDHHC20Q5W0Z9 365 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 HLA-DQA1Q5Y7H0 255 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 MBLAC2Q68D91 279 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 LRRN1Q6UXK5 716 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 CERS6Q6ZMG9 384 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF655Q8N720 491 aaPredicted RBP8.29□□□□□ -1.08
PBRM1-209ENST00000412587 NXPE2Q96DL1 559 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TNKS2Q9H2K2 1166 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 TMEM216Q9P0N5 145 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 RPS6KB2Q9UBS0 482 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 CORINQ9Y5Q5 1042 aa8.29□□□□□ -1.08
PBRM1-209ENST00000412587 SCO1O75880 301 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 OAZ2O95190 189 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 POP4O95707 220 aaKnown RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 THEGLP0DJG4 465 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 COX7A2P14406 83 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TSPAN8P19075 237 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 EDNRBP24530 442 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SCNN1AP37088 669 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 CAP1Q01518 475 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 PRKCDQ05655 676 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 VPS26BQ4G0F5 336 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SYPL2Q5VXT5 272 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF549Q6P9A3 640 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 GPRIN3Q6ZVF9 776 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 UBQLNLQ8IYU4 475 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 STYXQ8WUJ0 223 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 AUTS2Q8WXX7 1259 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 PSMG2Q969U7 264 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 AGAP2Q99490 1192 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 DPYSL5Q9BPU6 564 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ZFP14Q9HCL3 533 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 KRCC1Q9NPI7 259 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 DCAF16Q9NXF7 216 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 RNF11Q9Y3C5 154 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 PCDHGA7Q9Y5G6 932 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 CLCA3PQ9Y6N3 262 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 A0A1W2PRU2 124 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ISM1B1AKI9 464 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 OIP5O43482 229 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TBX18O95935 607 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 OTCP00480 354 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 NCK1P16333 377 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 MADCAM1Q13477 382 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 BCL7AQ4VC05 210 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SH3PXD2AQ5TCZ1 1133 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 C3orf33Q6P1S2 294 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 MAMDC4Q6UXC1 1216 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 DENND6BQ8NEG7 585 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 NTAN1Q96AB6 310 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TRIM43Q96BQ3 446 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 BIRC7Q96CA5 298 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 RANBP9Q96S59 729 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 C8orf33Q9H7E9 229 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TREM1Q9NP99 234 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 RNF186Q9NXI6 227 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SLC27A6Q9Y2P4 619 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 TCAF1Q9Y4C2 921 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 RGPD5Q99666 1765 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 STX16O14662 325 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 INSIG1O15503 277 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF780AO75290 641 aaPredicted RBP8.28□□□□□ -1.08
PBRM1-209ENST00000412587 ATP6AP2O75787 350 aa8.28□□□□□ -1.08
PBRM1-209ENST00000412587 SORBS2O94875 1100 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms