RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ZSCAN5DPP0CG00 497 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 RPL22P35268 128 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 AVPR1BP47901 424 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 NPY2RP49146 381 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SMSP52788 366 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PNLIPRP1P54315 467 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FAM53BQ14153 422 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 NDUFA9Q16795 377 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KLHL38Q2WGJ6 581 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 BTBD16Q32M84 506 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ACSBG2Q5FVE4 666 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SEL1L2Q5TEA6 688 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MFSD4BQ5TF39 518 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FCRLBQ6BAA4 426 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MRNIPQ6NTE8 343 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 LANCL3Q6ZV70 420 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PLD3Q8IV08 490 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF295-AS1Q8N0V1 137 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 OR9A4Q8NGU2 314 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ADAMTS18Q8TE60 1221 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 LPGAT1Q92604 370 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF354BQ96LW1 612 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CYTH2Q99418 400 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 VN1R1Q9GZP7 353 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 BFARQ9NZS9 450 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TINAGQ9UJW2 476 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 POLQO75417 2590 aa13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 NCOA6Q14686 2063 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQB2-229ENST00000411527 F8P00451 2351 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SCN3AQ9NY46 2000 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF839A8K0R7 811 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 H3BMM5 538 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 HAT1O14929 419 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PFDN6O15212 129 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TTI1O43156 1089 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SLC16A8O95907 504 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 STATHP02808 62 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ESR1P03372 595 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 AGAP20933 346 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ARNTP27540 789 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 HSD17B2P37059 387 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ST13P50502 369 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SNRPNP63162 240 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 RELAQ04206 551 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MINDY4Q4G0A6 757 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ACER2Q5QJU3 275 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SLC13A5Q86YT5 568 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 BEST3Q8N1M1 668 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF480Q8WV37 535 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MTFMTQ96DP5 389 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MFSD3Q96ES6 412 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MAGED4Q96JG8 741 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TCF12Q99081 682 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KCNK13Q9HB14 408 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 EIF2B3Q9NR50 452 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KLHL1Q9NR64 748 aa13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 C19orf25Q9UFG5 118 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB2-229ENST00000411527 OR2W5A6NFC9 320 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 E5RI56 91 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 E7ENX8 843 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 H7BY64 318 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 C19orf84I3L1E1 186 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SMAPO00193 183 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 AP3B1O00203 1094 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CLDN14O95500 239 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MLYCDO95822 493 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MGAT1P26572 445 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF75DP51815 510 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ABATP80404 500 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 BASP1P80723 227 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ALDH6A1Q02252 535 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TAP2Q03519 686 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TUBA3CQ13748 450 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KCNJ11Q14654 390 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CDSNQ15517 529 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TYSND1Q2T9J0 566 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 RNF187Q5TA31 235 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 THEMIS2Q5TEJ8 643 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PLAG1Q6DJT9 500 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 H3F3CQ6NXT2 135 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TUBA3EQ6PEY2 450 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SPPL2CQ8IUH8 684 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SHISA5Q8N114 240 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 OR51Q1Q8NH59 317 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 MCOLN3Q8TDD5 553 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 THAP3Q8WTV1 239 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GPR137Q96N19 417 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PRAP1Q96NZ9 151 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SIGLEC12Q96PQ1 595 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 EBNA1BP2Q99848 306 aaKnown RBP13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 KIFC1Q9BW19 673 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 HES7Q9BYE0 225 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 TSPAN10Q9H1Z9 355 aaPredicted RBP13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 SYBUQ9NX95 663 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms