RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 WFDC2Q14508 124 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HEPACAMQ14CZ8 416 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 NONOQ15233 471 aaKnown RBP eCLIP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PUM3Q15397 648 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 NSDHLQ15738 373 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMEM249Q2WGJ8 235 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 LGALS9BQ3B8N2 356 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 GRAMD1BQ3KR37 738 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 KRTAP19-5Q3LI72 72 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC45A4Q5BKX6 768 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 LELP1Q5T871 98 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ARHGAP40Q5TG30 622 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ANKRD22Q5VYY1 191 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 LGALS9CQ6DKI2 356 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CYS1Q717R9 158 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HAUS6Q7Z4H7 955 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 USP37Q86T82 979 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 LRRTM4Q86VH4 590 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HIPK1Q86Z02 1210 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR4N5Q8IXE1 308 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 UBALD2Q8IYN6 164 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 RNF113BQ8IZP6 322 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CLECL1Q8IZS7 167 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MYO1HQ8N1T3 1032 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNF619Q8N2I2 560 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 AOPEPQ8N6M6 819 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MAGEB6Q8N7X4 407 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 C12orf76Q8N812 135 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 KIAA1958Q8N8K9 716 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR52K2Q8NGK3 314 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR1B1Q8NGR6 318 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 OR14C36Q8NHC7 312 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 BLOC1S5Q8TDH9 187 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HNRNPLLQ8WVV9 542 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 RTF1Q92541 710 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 RSC1A1Q92681 617 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 USP6NLQ92738 828 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HGDQ93099 445 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PIGTQ969N2 578 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 EDC3Q96F86 508 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC35E1Q96K37 410 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 PRAC1Q96KF2 57 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MRGPRX4Q96LA9 322 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SIGLEC12Q96PQ1 595 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ADPGKQ9BRR6 497 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 FEM1AQ9BSK4 669 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 DUSP16Q9BY84 665 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZCWPW1Q9H0M4 648 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMEM185BQ9H7F4 350 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 DCLRE1BQ9H816 532 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 UPF2Q9HAU5 1272 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM60AQ9NP50 221 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CUTCQ9NTM9 273 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZNHIT6Q9NWK9 470 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 TMEM9Q9P0T7 183 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 DNAJB4Q9UDY4 337 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CHORDC1Q9UHD1 332 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC7A8Q9UHI5 535 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 SLC12A4Q9UP95 1085 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 HS3ST2Q9Y278 367 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 DGKBQ9Y6T7 804 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 S4R3C0 116 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 A3GALT2U3KPV4 340 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 ZBED9Q6R2W3 1325 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 CENPJQ9HC77 1338 aaPredicted RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 NYNRINQ9P2P1 1898 aaKnown RBP-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 FHOD3Q2V2M9 1422 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 MYOFQ9NZM1 2061 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 NUMA1Q14980 2115 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 VCANP13611 3396 aa-1.76□□□□□ -2.69
RNU4-88P-201ENST00000411220 RBBP6Q7Z6E9 1792 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 MKI67P46013 3256 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 DOCK8Q8NF50 2099 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 A0A087WZ62 844 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGHV3-38A0A0C4DH36 116 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 PTPDC1A2A3K4 754 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 C5orf63A6NC05 138 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 PP2D1A8MPX8 630 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 FAM90A26D6RGX4 464 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 AGRPO00253 132 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 F2RL2O00254 374 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 OGTO15294 1046 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 LDB2O43679 373 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 SRGAP2O75044 1071 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 NDUFS2O75306 463 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CPNE6O95741 557 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 GSRP00390 522 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ANXA1P04083 346 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 FHP07954 510 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 VIMP08670 466 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ATXN1LP0C7T5 689 aaKnown RBP-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 IGHV4-30-4P0DP06 118 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 HLA-DOBP13765 273 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 GNSP15586 552 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CKMT2P17540 419 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 VCAM1P19320 739 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 GZMHP20718 246 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 ABCB4P21439 1286 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 PRKCHP24723 683 aa-1.77□□□□□ -2.69
RNU4-88P-201ENST00000411220 CCNCP24863 283 aa-1.77□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms