RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OGDHQ02218 1023 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 GAD2Q05329 585 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 GFPT1Q06210 699 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 GRSF1Q12849 480 aaKnown RBP eCLIP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 NFATC3Q12968 1075 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MTAPQ13126 283 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SP140Q13342 867 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 TUBB3Q13509 450 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ANGPT1Q15389 498 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 TMEM196Q5HYL7 178 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 EFHC1Q5JVL4 640 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CACHD1Q5VU97 1274 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SLX4IPQ5VYV7 408 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CES4AQ5XG92 561 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 RNF43Q68DV7 783 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ABLIM2Q6H8Q1 611 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 RWDD4Q6NW29 188 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 DNAJC24Q6P3W2 148 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 WDR59Q6PJI9 974 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 KCTD20Q7Z5Y7 419 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CHSY1Q86X52 802 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FAM131BQ86XD5 332 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 PHF13Q86YI8 300 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CNGA4Q8IV77 575 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 IFT20Q8IY31 132 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MCOLN2Q8IZK6 566 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ST13P4Q8IZP2 240 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FAM185AQ8N0U4 392 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 LGI2Q8N0V4 545 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CFAP52Q8N1V2 620 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ARHGAP24Q8N264 748 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FBXW8Q8N3Y1 598 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MFSD4AQ8N468 514 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 OR6C4Q8NGE1 309 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 OR56B2PQ8NGI1 322 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 OR5AN1Q8NGI8 311 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 RPLP0P6Q8NHW5 317 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 PSMA8Q8TAA3 256 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 DDI1Q8WTU0 396 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CHPT1Q8WUD6 406 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 RXFP2Q8WXD0 754 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ABTB1Q969K4 478 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 TMCO6Q96DC7 493 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 OTUB2Q96DC9 234 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ARHGEF26Q96DR7 871 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 NPY6RQ99463 290 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CD180Q99467 661 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF184Q99676 751 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 OLFM1Q99784 485 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FERMT1Q9BQL6 677 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 DUSP23Q9BVJ7 150 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CACNG6Q9BXT2 260 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MRPL1Q9BYD6 325 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 DCLK3Q9C098 648 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 POLR1BQ9H9Y6 1135 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 USP29Q9HBJ7 922 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ABHD10Q9NUJ1 306 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SPATA6Q9NWH7 488 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ASNSD1Q9NWL6 643 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MPP6Q9NZW5 540 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CNIH4Q9P003 139 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 TNFRSF10DQ9UBN6 386 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 KCNN3Q9UGI6 736 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 TRPS1Q9UHF7 1281 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 TMEM59LQ9UK28 342 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 STAP1Q9ULZ2 295 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 NFU1Q9UMS0 254 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 ERVK-11Q9UQG0 969 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 CDYLQ9Y232 598 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 RCE1Q9Y256 329 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MRPS17Q9Y2R5 130 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.44□□□□□ -1.7
SF3B1-202ENST00000409915 MIA3Q5JRA6 1907 aa4.44□□□□□ -1.7
SF3B1-202ENST00000409915 FRYLO94915 3013 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TCRBV5S1A1TA0A578 114 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TCRBV5S2A0A599 114 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TBC1D3BA6NDS4 549 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FAM90A7PA6NKC0 464 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 C2CD4BA6NLJ0 364 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SYCE1LA8MT33 242 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FAM90A22PA8MWA6 464 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 WASH4PA8MWX3 477 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FAM90A12PA8MX19 464 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 FAM90A23PA8MXZ1 464 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 B8ZZF3 427 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 F8W735 103 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 K7EQS6 105 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 M0QYG6 137 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 BET1O15155 118 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 MAGEB3O15480 346 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 AQP9O43315 295 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 NDUFA2O43678 99 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SULT1B1O43704 296 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SCO2O43819 266 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CACNG3O60359 315 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 TBL1XO60907 577 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 SLCO2B1O94956 709 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 EPN2O95208 641 aa4.43□□□□□ -1.7
SF3B1-202ENST00000409915 KLF8O95600 359 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-202ENST00000409915 CRYZL1O95825 349 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms