RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 HTR4Q13639 388 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ZNHIT3Q15649 155 aaPredicted RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 FAM98BQ52LJ0 330 aaKnown RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 REP15Q6BDI9 236 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 TMEM207Q6UWW9 146 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 FAM43BQ6ZT52 329 aaPredicted RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 KIAA2013Q8IYS2 634 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 SMYD1Q8NB12 490 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 OR52E1Q8NGJ3 308 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 GPR151Q8TDV0 419 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 DNAJC9Q8WXX5 260 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 RIBC2Q9H4K1 309 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 GIN1Q9NXP7 522 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ACSL6Q9UKU0 697 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 EMCNQ9ULC0 261 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 A0A1W2PRB8 838 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 GTPBP1O00178 669 aaKnown RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 MATN2O00339 956 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 CLDN4O14493 209 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 B3GALT2O43825 422 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 MED21Q13503 144 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 GLYATQ6IB77 296 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ZNF480Q8WV37 535 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 SLC22A18Q96BI1 424 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 BTBD9Q96Q07 612 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 SLC23A2Q9UGH3 650 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 UTS2RQ9UKP6 389 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 PPIEQ9UNP9 301 aaKnown RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 HEBP2Q9Y5Z4 205 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 R4GN57 208 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 HMX2A2RU54 273 aa11□□□□□ -0.65
SNX13-202ENST00000409604 PTGES3LE9PB15 166 aa11□□□□□ -0.65
SNX13-202ENST00000409604 HTRA2O43464 458 aaPredicted RBP11□□□□□ -0.65
SNX13-202ENST00000409604 AP2A2O94973 939 aa11□□□□□ -0.65
SNX13-202ENST00000409604 FASP25445 335 aa11□□□□□ -0.65
SNX13-202ENST00000409604 OCA2Q04671 838 aa11□□□□□ -0.65
SNX13-202ENST00000409604 CSTF3Q12996 717 aaKnown RBP11□□□□□ -0.65
SNX13-202ENST00000409604 RFTN2Q52LD8 501 aaPredicted RBP11□□□□□ -0.65
SNX13-202ENST00000409604 PELI3Q8N2H9 469 aa11□□□□□ -0.65
SNX13-202ENST00000409604 PARP8Q8N3A8 854 aa11□□□□□ -0.65
SNX13-202ENST00000409604 CADM2Q8N3J6 435 aa11□□□□□ -0.65
SNX13-202ENST00000409604 ZNF276Q8N554 614 aa11□□□□□ -0.65
SNX13-202ENST00000409604 SMPDL3BQ92485 455 aa11□□□□□ -0.65
SNX13-202ENST00000409604 NDC1Q9BTX1 674 aa11□□□□□ -0.65
SNX13-202ENST00000409604 EHD1Q9H4M9 534 aa11□□□□□ -0.65
SNX13-202ENST00000409604 MMP17Q9ULZ9 603 aa11□□□□□ -0.65
SNX13-202ENST00000409604 RUVBL1Q9Y265 456 aaKnown RBP11□□□□□ -0.65
SNX13-202ENST00000409604 SLC9B1P1A6NJY1 282 aa11□□□□□ -0.65
SNX13-202ENST00000409604 NOS3P29474 1203 aa11□□□□□ -0.65
SNX13-202ENST00000409604 RAB28P51157 221 aa11□□□□□ -0.65
SNX13-202ENST00000409604 ERVK-8P63133 956 aa11□□□□□ -0.65
SNX13-202ENST00000409604 LASP1Q14847 261 aaKnown RBP11□□□□□ -0.65
SNX13-202ENST00000409604 GHDCQ8N2G8 530 aa11□□□□□ -0.65
SNX13-202ENST00000409604 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
SNX13-202ENST00000409604 LRRC3Q9BY71 257 aa11□□□□□ -0.65
SNX13-202ENST00000409604 TCEAL2Q9H3H9 227 aaPredicted RBP11□□□□□ -0.65
SNX13-202ENST00000409604 EXO5Q9H790 373 aa11□□□□□ -0.65
SNX13-202ENST00000409604 SSU72Q9NP77 194 aaKnown RBP11□□□□□ -0.65
SNX13-202ENST00000409604 LRIT1Q9P2V4 623 aa11□□□□□ -0.65
SNX13-202ENST00000409604 SCOCQ9UIL1 159 aa11□□□□□ -0.65
SNX13-202ENST00000409604 CCNDBP1O95273 360 aa11□□□□□ -0.65
SNX13-202ENST00000409604 PDGFBP01127 241 aaPredicted RBP11□□□□□ -0.65
SNX13-202ENST00000409604 C1GALT1C1LP0DN25 315 aa11□□□□□ -0.65
SNX13-202ENST00000409604 NDUFS1P28331 727 aa11□□□□□ -0.65
SNX13-202ENST00000409604 MAGEA6P43360 314 aa11□□□□□ -0.65
SNX13-202ENST00000409604 TNFRSF4P43489 277 aa11□□□□□ -0.65
SNX13-202ENST00000409604 RABIFP47224 123 aa11□□□□□ -0.65
SNX13-202ENST00000409604 LAPTM4AQ15012 233 aa11□□□□□ -0.65
SNX13-202ENST00000409604 GPR68Q15743 365 aa11□□□□□ -0.65
SNX13-202ENST00000409604 MTX3Q5HYI7 312 aa11□□□□□ -0.65
SNX13-202ENST00000409604 LPCAT4Q643R3 524 aa11□□□□□ -0.65
SNX13-202ENST00000409604 B4GALNT2Q8NHY0 566 aa11□□□□□ -0.65
SNX13-202ENST00000409604 RETREG1Q9H6L5 497 aa11□□□□□ -0.65
SNX13-202ENST00000409604 TAAR2Q9P1P5 351 aa11□□□□□ -0.65
SNX13-202ENST00000409604 TMCO1Q9UM00 188 aa11□□□□□ -0.65
SNX13-202ENST00000409604 CLCA3PQ9Y6N3 262 aa11□□□□□ -0.65
SNX13-202ENST00000409604 CCDC189A1A4V9 331 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
SNX13-202ENST00000409604 GABRG2P18507 467 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 ANXA11P50995 505 aaKnown RBP10.99□□□□□ -0.65
SNX13-202ENST00000409604 ELF3P78545 371 aaPredicted RBP10.99□□□□□ -0.65
SNX13-202ENST00000409604 MC1RQ01726 317 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 NDUFA9Q16795 377 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 TRMT5Q32P41 509 aaKnown RBP10.99□□□□□ -0.65
SNX13-202ENST00000409604 NUDT13Q86X67 352 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 P3H2Q8IVL5 708 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 GATSQ8NAP1 163 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 SMRP1Q8NCR6 262 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 RCBTB1Q8NDN9 531 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 FAM13CQ8NE31 585 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 ZFP28Q8NHY6 868 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 DENND1AQ8TEH3 1009 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 AGAP11Q8TF27 550 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 PEX11GQ96HA9 241 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 NR1H4Q96RI1 486 aaPredicted RBP10.99□□□□□ -0.65
SNX13-202ENST00000409604 MRGBPQ9NV56 204 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 ADPRHL2Q9NX46 363 aa10.99□□□□□ -0.65
SNX13-202ENST00000409604 SNX7Q9UNH6 387 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms