RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PAPD5Q8NDF8 572 aaKnown RBP19.95■□□□□ 0.78
USP39-203ENST00000409470 FAM120BQ96EK7 910 aaKnown RBP19.95■□□□□ 0.78
USP39-203ENST00000409470 CNBD2Q96M20 576 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 RNF145Q96MT1 663 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 NECTIN4Q96NY8 510 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 CENPKQ9BS16 269 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ACAT2Q9BWD1 397 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TRIT1Q9H3H1 467 aaKnown RBP19.95■□□□□ 0.78
USP39-203ENST00000409470 FBRSQ9HAH7 460 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ACSL5Q9ULC5 683 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 DPPA5A6NC42 116 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 CDH1P12830 882 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ADPRHP54922 357 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 DUOXA1Q1HG43 343 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 HKDC1Q2TB90 917 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 TMEM259Q4ZIN3 620 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 UBE2E3Q969T4 207 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 MSLNLQ96KJ4 702 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ZNF597Q96LX8 424 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 PANX1Q96RD7 426 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 ZNF576Q9H609 170 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 GORASP2Q9H8Y8 452 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 DMRT3Q9NQL9 472 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 MOSPD1Q9UJG1 213 aa19.95■□□□□ 0.78
USP39-203ENST00000409470 A0A1W2PQF6 199 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 FPGTO14772 594 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 PCDH7O60245 1069 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 TGFB1P01137 390 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 TIA1P31483 386 aaKnown RBP eCLIP19.94■□□□□ 0.78
USP39-203ENST00000409470 TRPC1P48995 793 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 C21orf58P58505 322 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 PHEXP78562 749 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 ANKRD26P1Q6NSI1 321 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 TDHQ8IZJ6 230 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 OR8J2Q8NGG1 315 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 SH3KBP1Q96B97 665 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 MIEF2Q96C03 454 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 CHID1Q9BWS9 393 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 SPNS1Q9H2V7 528 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 FAM120CQ9NX05 1096 aaKnown RBP19.94■□□□□ 0.78
USP39-203ENST00000409470 ADGRE2Q9UHX3 823 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 PCM1Q15154 2024 aa19.94■□□□□ 0.78
USP39-203ENST00000409470 F5P12259 2224 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 C7orf72A4D263 438 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 SOCS2O14508 198 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 SCAMP2O15127 329 aaKnown RBP19.93■□□□□ 0.78
USP39-203ENST00000409470 MT-ND1P03886 318 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 PTPN6P29350 595 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 HSD17B2P37059 387 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 HPCAL1P37235 193 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 CHN2P52757 468 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 ARHGAP19Q14CB8 494 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 PPP4R4Q6NUP7 873 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 UGT2A3Q6UWM9 527 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 HORMAD1Q86X24 394 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 MICU2Q8IYU8 434 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FAM162AQ96A26 154 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 MYOCQ99972 504 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FZD3Q9NPG1 666 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 MAPRE3Q9UPY8 281 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 PIAS3Q9Y6X2 628 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FAM220BPB1ANY3 271 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 CXCR6O00574 342 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 CPSF4O95639 269 aaKnown RBP19.93■□□□□ 0.78
USP39-203ENST00000409470 LDLRP01130 860 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FUCA1P04066 466 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 HOXB9P17482 250 aaPredicted RBP19.93■□□□□ 0.78
USP39-203ENST00000409470 IGFALSP35858 605 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 CCT8P50990 548 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 CYP2A13Q16696 494 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FAM98BQ52LJ0 330 aaKnown RBP19.93■□□□□ 0.78
USP39-203ENST00000409470 CPTPQ5TA50 214 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 DUS1LQ6P1R4 473 aaKnown RBP19.93■□□□□ 0.78
USP39-203ENST00000409470 C17orf64Q86WR6 236 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 KRT78Q8N1N4 520 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 ZNF740Q8NDX6 193 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 SNX19Q92543 992 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 NCLNQ969V3 563 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FAM131CQ96AQ9 280 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 FERD3LQ96RJ6 166 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 PRPF18Q99633 342 aaKnown RBP19.93■□□□□ 0.78
USP39-203ENST00000409470 NRTNQ99748 197 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 C9orf16Q9BUW7 83 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 DUSP26Q9BV47 211 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 OSBPL11Q9BXB4 747 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 OR51B5Q9H339 312 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 LIMD1Q9UGP4 676 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 TAC3Q9UHF0 121 aa19.93■□□□□ 0.78
USP39-203ENST00000409470 CCDC85CA6NKD9 419 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 EVPLLA8MZ36 301 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 SAP18O00422 153 aaKnown RBP19.92■□□□□ 0.78
USP39-203ENST00000409470 SLC31A1O15431 190 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 LATO43561 262 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 SCELO95171 688 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 LAMP1P11279 417 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 ERGP11308 486 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 HNRNPFP52597 415 aaKnown RBP19.92■□□□□ 0.78
USP39-203ENST00000409470 WNT3P56703 355 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 DMPKQ09013 629 aa19.92■□□□□ 0.78
USP39-203ENST00000409470 GRSF1Q12849 480 aaKnown RBP eCLIP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms