RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 HDDC2Q7Z4H3 204 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TREML1Q86YW5 311 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CMASQ8NFW8 434 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 OR5T3Q8NGG3 340 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 SNIP1Q8TAD8 396 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FAM110BQ8TC76 370 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM234Q8WY98 164 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 GPATCH1Q9BRR8 931 aaKnown RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 NAA11Q9BSU3 229 aaPredicted RBP4.87□□□□□ -1.63
SCN3A-203ENST00000409101 FUT8Q9BYC5 575 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 COMMD4Q9H0A8 199 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 CRISPLD1Q9H336 500 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TAS2R9Q9NYW1 312 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 C3orf18Q9UK00 162 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 PLCL2Q9UPR0 1127 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 TMED5Q9Y3A6 229 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 MAU2Q9Y6X3 613 aa4.87□□□□□ -1.63
SCN3A-203ENST00000409101 LINC00854A0A1B0GVQ3 168 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 SOBPA7XYQ1 873 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PSMD11O00231 422 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TBX1O43435 398 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TPST2O60704 377 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 AHSA1O95433 338 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 EPOP01588 193 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 JUNP05412 331 aaKnown RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF20P17024 532 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 IMPDH1P20839 514 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PRPS1L1P21108 318 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 KCNC1P48547 511 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CLDN2P57739 230 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 IRF9Q00978 393 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PLP2Q04941 152 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PCDH1Q08174 1060 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 RASGEF1BQ0VAM2 473 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TUBB3Q13509 450 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PCBP2Q15366 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TIMM50Q3ZCQ8 353 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 FIGLAQ6QHK4 219 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 DPPA4Q7L190 304 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 LRRTM3Q86VH5 581 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PACS2Q86VP3 889 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TBC1D21Q8IYX1 336 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 FAM47BQ8NA70 645 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PPM1MQ96MI6 270 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 KCNC2Q96PR1 638 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 YIPF3Q9GZM5 350 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 MUC13Q9H3R2 512 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 SLAMF7Q9NQ25 335 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 MRPL39Q9NYK5 338 aaKnown RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PDP1Q9P0J1 537 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 MYH2Q9UKX2 1941 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 GFRA2O00451 464 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CHST10O43529 356 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 DFNA5O60443 496 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 KHDRBS3O75525 346 aaKnown RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TCEA3O75764 348 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 SERPINA1P01009 418 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 MATN1P21941 496 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 GLDCP23378 1020 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PIK3CBP42338 1070 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CLCN4P51793 760 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 POU6F2P78424 691 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 RCAN2Q14206 197 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 EGFLAMQ63HQ2 1017 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 FRRS1Q6ZNA5 592 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TRABD2AQ86V40 505 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 ZDHHC14Q8IZN3 488 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 LRRC57Q8N9N7 239 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF689Q96CS4 500 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CNDP2Q96KP4 475 aaKnown RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 C1QTNF1Q9BXJ1 281 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CD244Q9BZW8 370 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 GPN2Q9H9Y4 310 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 HCSTQ9UBK5 93 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 DLG5Q8TDM6 1919 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 KIR2DS5A0A0G2JLQ3 304 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 A0A0G2JNG1 304 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 ZNF487B1APH4 448 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 KIR2DS3K7RE56 304 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CAPN5O15484 640 aaPredicted RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 DNAJA2O60884 412 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 UGT2B11O75310 529 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 SCELO95171 688 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CBX6O95503 412 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 PRAMEF12O95522 483 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 RCVRNP35243 200 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 FNTBP49356 437 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 SRYQ05066 204 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 KIR2DS5Q14953 304 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 IFI44LQ53G44 452 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 ALYREFQ86V81 257 aaKnown RBP4.86□□□□□ -1.63
SCN3A-203ENST00000409101 SLC5A8Q8N695 610 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CLDN19Q8N6F1 224 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 CAMK1GQ96NX5 476 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TRIB3Q96RU7 358 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 HBEGFQ99075 208 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 TRIM2Q9C040 744 aa4.86□□□□□ -1.63
SCN3A-203ENST00000409101 C6orf62Q9GZU0 229 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms