RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ZNF501Q96CX3 271 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 MS4A14Q96JA4 679 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 TRIM56Q9BRZ2 755 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 FGF21Q9NSA1 209 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 STARD5Q9NSY2 213 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 POMT2Q9UKY4 750 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 ICKQ9UPZ9 632 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 TCAF1Q9Y4C2 921 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 COLEC10Q9Y6Z7 277 aa9.34□□□□□ -0.91
NIF3L1-202ENST00000409020 NBASA2RRP1 2371 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 HEATR9A2RTY3 570 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 KRT87PA6NCN2 255 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ERI2A8K979 691 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PSMD3O43242 534 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PEX11AO75192 247 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 AP2A2O94973 939 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 KLHL2O95198 593 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 LYNP07948 512 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 F7P08709 466 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 KRT16P08779 473 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ENO2P09104 434 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ST6GAL1P15907 406 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ADRA1DP25100 572 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ACADLP28330 430 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PRDX3P30048 256 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PPARGP37231 505 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 GCGRP47871 477 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PCYT1AP49585 367 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 BCAP31P51572 246 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 OLR1P78380 273 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 HSD11B2P80365 405 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 CCNG2Q16589 344 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ZNF789Q5FWF6 425 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 TTC27Q6P3X3 843 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PRICKLE2Q7Z3G6 844 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PTRH1Q86Y79 214 aaKnown RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 CLVS1Q8IUQ0 354 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ADGRF3Q8IZF5 1079 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ARHGAP24Q8N264 748 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 AGGF1Q8N302 714 aaeCLIP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PRELID2Q8N945 189 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 OR6P1Q8NGX9 317 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 OR4L1Q8NH43 312 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 LILRB4Q8NHJ6 448 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 HEXDCQ8WVB3 486 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 TFGQ92734 400 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 KIAA1143Q96AT1 154 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 RANBP9Q96S59 729 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 FRMD8P1Q9BZ68 369 aaPredicted RBP9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 SRMSQ9H3Y6 488 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 DCLRE1BQ9H816 532 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 TMBIM4Q9HC24 238 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 LHX9Q9NQ69 397 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 SOHLH2Q9NX45 425 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 SPHK1Q9NYA1 384 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 PAK5Q9P286 719 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 RARRES3Q9UL19 164 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 ERVK-11Q9UQG0 969 aa9.33□□□□□ -0.92
NIF3L1-202ENST00000409020 SLC5A10A0PJK1 596 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 FUOMA2VDF0 154 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 IFRD1O00458 451 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SLC28A2O43868 658 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 AVILO75366 819 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 KATNA1O75449 491 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ZBTB11O95625 1053 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PRKACAP17612 351 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ARNTP27540 789 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 NMBRP28336 390 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PEBP1P30086 187 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CCR7P32248 378 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ARL4DP49703 201 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 VPS41P49754 854 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 HNRNPFP52597 415 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CHRNEQ04844 493 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 KCNAB2Q13303 367 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ERV3-1Q14264 604 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PHKG1Q16816 387 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ANKRD22Q5VYY1 191 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PAPD7Q5XG87 772 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ALKBH2Q6NS38 261 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 NIPAL1Q6NVV3 410 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 DHRS4L2Q6PKH6 230 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 AFTPHQ6ULP2 937 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 UNC5DQ6UXZ4 953 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 C4orf22Q6V702 233 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 AMIGO1Q86WK6 493 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 OR1L3Q8NH93 324 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 FLVCR1-AS1Q8TAF5 88 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TMEM237Q96Q45 408 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CD180Q99467 661 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 GPATCH1Q9BRR8 931 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 MRPL1Q9BYD6 325 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 TFB2MQ9H5Q4 396 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 PDE7BQ9NP56 450 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 ZNF71Q9NQZ8 489 aaPredicted RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 FARSBQ9NSD9 589 aaKnown RBP9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SYBUQ9NX95 663 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 SAMD15Q9P1V8 674 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 CDYLQ9Y232 598 aa9.32□□□□□ -0.92
NIF3L1-202ENST00000409020 IFT52Q9Y366 437 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms