RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 VSX2P58304 361 aaPredicted RBP16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 ARF3P61204 181 aaPredicted RBP16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 HERVK_113P63132 956 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 PCDH1Q08174 1060 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 CHIT1Q13231 466 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 MPP2Q14168 576 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 DOC2AQ14183 400 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 WASHC2DQ5SRD0 308 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZNF678Q5SXM1 525 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 ATG9BQ674R7 924 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 METTL2BQ6P1Q9 378 aaKnown RBP16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 CYB5D1Q6P9G0 228 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 GOLGA7Q7Z5G4 137 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 SLC22A9Q8IVM8 553 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 OR8K5Q8NH50 307 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 MDM1Q8TC05 714 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 RDH11Q8TC12 318 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 WDR34Q96EX3 536 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 TMEM237Q96Q45 408 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZPBPQ9BS86 351 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 SARGQ9BW04 601 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 ERVK-6Q9BXR3 956 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 SPRY4Q9C004 299 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 STMN4Q9H169 189 aaPredicted RBP16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 IPPKQ9H8X2 491 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZBTB26Q9HCK0 441 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 STARD5Q9NSY2 213 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 GEMIN8Q9NWZ8 242 aaKnown RBP16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 COPG2Q9UBF2 871 aa16.07■□□□□ 0.16
HMGA1P7-201ENST00000406908 KCNE1BA0A087WTH5 132 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 TRBC2A0A5B9 178 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 PPP6CO00743 305 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 OR1F1O43749 312 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 H2AFYO75367 372 aaKnown RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 CAPNS1P04632 268 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 CD22P20273 847 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 GRK3P35626 688 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 BCL6P41182 706 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 CASP2P42575 452 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 ETV4P43268 484 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 CDH13P55290 713 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 MAGOHP61326 146 aaKnown RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 RPS15AP62244 130 aaKnown RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 REEP5Q00765 189 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 IRF8Q02556 426 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 COL9A2Q14055 689 aaPredicted RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 E2F2Q14209 437 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 XKR6Q5GH73 641 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 AGBL2Q5U5Z8 902 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 VN1R4Q7Z5H5 301 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 MFSD9Q8NBP5 474 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZNF483Q8TF39 744 aaPredicted RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZNF578Q96N58 590 aaPredicted RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 TEFMQ96QE5 360 aaKnown RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 SH3GL2Q99962 352 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 AIF1LQ9BQI0 150 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 EHD1Q9H4M9 534 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 NOL11Q9H8H0 719 aaKnown RBP16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 KCNK9Q9NPC2 374 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 OXSMQ9NWU1 459 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 PCDHGA4Q9Y5G9 962 aa16.06■□□□□ 0.16
HMGA1P7-201ENST00000406908 C1QTNF9BB2RNN3 333 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 OR7A17O14581 309 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZNF749O43361 778 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 SCRG1O75711 98 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 KIAA0754O94854 1291 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 SUPT7LO94864 414 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 STATHP02808 62 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 NTRK1P04629 796 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 EIF2S1P05198 315 aaKnown RBP16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 C1QTNF9P0C862 333 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 TSPAN8P19075 237 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 SCTRP47872 440 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 PIK3CGP48736 1102 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 DNAJB13P59910 316 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ERVPABLB-1P60509 514 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 SLBPQ14493 270 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 PCLAFQ15004 111 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 TBCCQ15814 346 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 TBC1D25Q3MII6 688 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZFAND4Q86XD8 727 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 C10orf107Q8IVU9 208 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 GPR135Q8IZ08 494 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZNF655Q8N720 491 aaPredicted RBP16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 SLC38A9Q8NBW4 561 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 CCDC126Q96EE4 140 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 THAP11Q96EK4 314 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 L3HYPDHQ96EM0 354 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 SEMA4BQ9NPR2 832 aaPredicted RBP16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ENAMQ9NRM1 1142 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 THSD1Q9NS62 852 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 IRAK4Q9NWZ3 460 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 MID2Q9UJV3 735 aa16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZNF490Q9ULM2 529 aaPredicted RBP16.05■□□□□ 0.16
HMGA1P7-201ENST00000406908 ZSCAN9O15535 394 aaPredicted RBP16.04■□□□□ 0.16
HMGA1P7-201ENST00000406908 P2RX6O15547 441 aa16.04■□□□□ 0.16
HMGA1P7-201ENST00000406908 PRPF4O43172 522 aaKnown RBP eCLIP16.04■□□□□ 0.16
HMGA1P7-201ENST00000406908 KATNA1O75449 491 aa16.04■□□□□ 0.16
HMGA1P7-201ENST00000406908 STK17BO94768 372 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms