RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TBC1D3HP0C7X1 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 CKMT2P17540 419 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 CDKN2CP42773 168 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 PHEXP78562 749 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TMEM259Q4ZIN3 620 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3GQ6DHY5 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3CQ6IPX1 549 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 PPP4R4Q6NUP7 873 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 MICU2Q8IYU8 434 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 TBC1D3Q8IZP1 549 aaPredicted RBP23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 AURKBQ96GD4 344 aaPredicted RBP23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 DMRT3Q9NQL9 472 aa23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 FAM120CQ9NX05 1096 aaKnown RBP23.77■■□□□ 1.4
DNMT3A-206ENST00000406659 GNG14A0A1W2PPG7 69 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 DPPA5A6NC42 116 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 FPGTO14772 594 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 SCELO95171 688 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 ACP5P13686 325 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 HOXB9P17482 250 aaPredicted RBP23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 RPL10P27635 214 aaKnown RBP23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 PTPN6P29350 595 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 TIA1P31483 386 aaKnown RBP eCLIP23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 CHN2P52757 468 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 MEF2AQ02078 507 aaPredicted RBP23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 HORMAD1Q86X24 394 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 OR8J2Q8NGG1 315 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 FAM131CQ96AQ9 280 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 RNF145Q96MT1 663 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 CENPKQ9BS16 269 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 ZNF576Q9H609 170 aa23.76■■□□□ 1.39
DNMT3A-206ENST00000406659 A0A1W2PQF6 199 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 FAM220BPB1ANY3 271 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 SCAMP2O15127 329 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PCDH7O60245 1069 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 COL9A1P20849 921 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 HPCAL1P37235 193 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 ADPRHP54922 357 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CYP2A13Q16696 494 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 FAM98BQ52LJ0 330 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 TDHQ8IZJ6 230 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 KRT78Q8N1N4 520 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PACRGLQ8N7B6 248 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CNBD2Q96M20 576 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PANX1Q96RD7 426 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PRPF18Q99633 342 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 C9orf16Q9BUW7 83 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CHID1Q9BWS9 393 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 OSGEPL1Q9H4B0 414 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 RMI1Q9H9A7 625 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PDP2Q9P2J9 529 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 ADGRE2Q9UHX3 823 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 DOCK9Q9BZ29 2069 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 C7orf72A4D263 438 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 EVPLLA8MZ36 301 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CXCR6O00574 342 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 LDLRP01130 860 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 TGFB1P01137 390 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 ERGP11308 486 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 MAT2AP31153 395 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PIK3CBP42338 1070 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CCT8P50990 548 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 DMPKQ09013 629 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 ATP6AP1Q15904 470 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 HKDC1Q2TB90 917 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 INTS11Q5TA45 600 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CAPRIN2Q6IMN6 1127 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 UGT2A3Q6UWM9 527 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 C17orf64Q86WR6 236 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 CALHM3Q86XJ0 350 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 FAM162AQ96A26 154 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 SH3KBP1Q96B97 665 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 MIEF2Q96C03 454 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 TIMM29Q9BSF4 260 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 ACAT2Q9BWD1 397 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 OSBPL11Q9BXB4 747 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 SPNS1Q9H2V7 528 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 PREBQ9HCU5 417 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 SPATA7Q9P0W8 599 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 MOSPD1Q9UJG1 213 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 SCML1Q9UN30 329 aa23.75■■□□□ 1.39
DNMT3A-206ENST00000406659 SOCS2O14508 198 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 FUCA1P04066 466 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 PIM1P11309 404 aaPredicted RBP23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 IGFALSP35858 605 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 WNT3P56703 355 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 GRSF1Q12849 480 aaKnown RBP eCLIP23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 CPTPQ5TA50 214 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 SIPA1Q96FS4 1042 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 FERD3LQ96RJ6 166 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 DUSP26Q9BV47 211 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 LIMD1Q9UGP4 676 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 NCKAP1Q9Y2A7 1128 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 PIAS3Q9Y6X2 628 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 PCM1Q15154 2024 aa23.74■■□□□ 1.39
DNMT3A-206ENST00000406659 CPSF4O95639 269 aaKnown RBP23.73■■□□□ 1.39
DNMT3A-206ENST00000406659 CEACAM5P06731 702 aa23.73■■□□□ 1.39
DNMT3A-206ENST00000406659 LAMP1P11279 417 aa23.73■■□□□ 1.39
DNMT3A-206ENST00000406659 CHRNB3Q05901 458 aa23.73■■□□□ 1.39
DNMT3A-206ENST00000406659 ANKRD26P1Q6NSI1 321 aa23.73■■□□□ 1.39
DNMT3A-206ENST00000406659 GALNT18Q6P9A2 607 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms