RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 SYT10Q6XYQ8 523 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 RIPOR1Q6ZS17 1223 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 OR4N4Q8N0Y3 316 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 OTUD6BQ8N6M0 293 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 SIRT6Q8N6T7 355 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 OR2A1Q8NGT9 310 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 SUN3Q8TAQ9 357 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 ZNF669Q96BR6 464 aaPredicted RBP11.74□□□□□ -0.53
PRAME-204ENST00000403441 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 MVB12AQ96EY5 273 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 C10orf90Q96M02 699 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 EBNA1BP2Q99848 306 aaKnown RBP11.74□□□□□ -0.53
PRAME-204ENST00000403441 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 NAT9Q9BTE0 207 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 DPH7Q9BTV6 452 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 PLA2G3Q9NZ20 509 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 SPATA7Q9P0W8 599 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 RUVBL2Q9Y230 463 aaKnown RBP11.74□□□□□ -0.53
PRAME-204ENST00000403441 MED16Q9Y2X0 877 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 NFS1Q9Y697 457 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 TEX264Q9Y6I9 313 aa11.74□□□□□ -0.53
PRAME-204ENST00000403441 IGHV1-45A0A0A0MS14 117 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 TRGV8A0A0C4DH27 118 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 A0A1W2PQ72 361 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 OR2A25A4D2G3 310 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 H3BMM5 538 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 NDUFS3O75489 264 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 UNC5CO95185 931 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 TTC4O95801 387 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 HEXBP07686 556 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 CASQ1P31415 396 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 RPA3P35244 121 aaPredicted RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 CASP6P55212 293 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 EEF1A2Q05639 463 aaKnown RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 FRG1Q14331 258 aaKnown RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 LONRF1Q17RB8 773 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 PRTGQ2VWP7 1150 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 CCSMST1Q4G0I0 132 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 STEAP4Q687X5 459 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 CASC4Q6P4E1 433 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 RPTNQ6XPR3 784 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 GDF7Q7Z4P5 450 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 GALNT7Q86SF2 657 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 SDCCAG8Q86SQ7 713 aaPredicted RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 IGDCC3Q8IVU1 814 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 CNTN4Q8IWV2 1026 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 CSNK1A1LQ8N752 337 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.533e-8■■■□□ 17.3
PRAME-204ENST00000403441 ITLN2Q8WWU7 325 aaPredicted RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 PSMF1Q92530 271 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 HAS2Q92819 552 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 RERGQ96A58 199 aaPredicted RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 SNF8Q96H20 258 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 TAAR6Q96RI8 345 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 KRT12Q99456 494 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 ACAT2Q9BWD1 397 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 CHST11Q9NPF2 352 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 MKKSQ9NPJ1 570 aaPredicted RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 UTP6Q9NYH9 597 aaKnown RBP11.73□□□□□ -0.53
PRAME-204ENST00000403441 KLHL42Q9P2K6 505 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 TEKT2Q9UIF3 430 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 VPS9D1Q9Y2B5 631 aa11.73□□□□□ -0.53
PRAME-204ENST00000403441 A0A1W2PPV9 198 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 KRT87PA6NCN2 255 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 FAM187AA6NFU0 413 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 H0YGG7 62 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 NRP2O60462 931 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 BANF1O75531 89 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 RASAL1O95294 804 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ICAM2P13598 275 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 PTGER4P35408 488 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 SLC1A2P43004 574 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 RPL21P46778 160 aaKnown RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 ITGA8P53708 1063 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 EIF3BP55884 814 aaKnown RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 ARF3P61204 181 aaPredicted RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 RBPJQ06330 500 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ZXDCQ2QGD7 858 aaPredicted RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 SPANXN3Q5MJ09 141 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ABHD17BQ5VST6 288 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 DUPD1Q68J44 220 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ZNF470Q6ECI4 717 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 FAAH2Q6GMR7 532 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ZNF549Q6P9A3 640 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 BNC2Q6ZN30 1099 aaPredicted RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 LAPTM4BQ86VI4 370 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 DENND6AQ8IWF6 608 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ZNF808Q8N4W9 903 aaPredicted RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 DNAJB8Q8NHS0 232 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 SMPDL3AQ92484 453 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 MMABQ96EY8 250 aaPredicted RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 ERP44Q9BS26 406 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 RNF32Q9H0A6 362 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 MRPS30Q9NP92 439 aaKnown RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 FAM114A2Q9NRY5 505 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 ABI3Q9P2A4 366 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 STOX2Q9P2F5 926 aaPredicted RBP11.72□□□□□ -0.53
PRAME-204ENST00000403441 SEC14L3Q9UDX4 400 aa11.72□□□□□ -0.53
PRAME-204ENST00000403441 TSR3Q9UJK0 312 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms