RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 MLF2Q15773 248 aaPredicted RBP11.81□□□□□ -0.52
CLIP4-203ENST00000401617 DUOXA1Q1HG43 343 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 OR4F3Q6IEY1 312 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 VN1R5Q7Z5H4 357 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 TMEM132CQ8N3T6 1108 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 SLC44A3Q8N4M1 653 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 MARVELD2Q8N4S9 558 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 ABHD11Q8NFV4 315 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 EME1Q96AY2 570 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 COQ8BQ96D53 544 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 SIPA1Q96FS4 1042 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 ZNF597Q96LX8 424 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 THUMPD3Q9BV44 507 aaKnown RBP11.81□□□□□ -0.52
CLIP4-203ENST00000401617 REXO4Q9GZR2 422 aaKnown RBP11.81□□□□□ -0.52
CLIP4-203ENST00000401617 PCBD2Q9H0N5 130 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 SEMA6AQ9H2E6 1030 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 PELI2Q9HAT8 420 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 WASH6PQ9NQA3 447 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 AURKCQ9UQB9 309 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 WDR37Q9Y2I8 494 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 TDRKHQ9Y2W6 561 aaKnown RBP11.81□□□□□ -0.52
CLIP4-203ENST00000401617 GMEB1Q9Y692 573 aa11.81□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 PRR23AA6NEV1 266 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 SHISA7A6NL88 538 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 FAM220BPB1ANY3 271 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 C10orf142B7Z368 130 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 SCAMP2O15127 329 aaKnown RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 AKAP10O43572 662 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 KLHL18O94889 574 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 B3GALT4O96024 378 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 ANXA4P09525 319 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 CDH1P12830 882 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 ACP5P13686 325 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 FASP25445 335 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 POLE2P56282 527 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 PPP2CBP62714 309 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 PPP2CAP67775 309 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 PRKCQQ04759 706 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TSTA3Q13630 321 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 SF1Q15637 639 aaKnown RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 INTS11Q5TA45 600 aaKnown RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 PPP4R4Q6NUP7 873 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 CHST15Q7LFX5 561 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 GPR155Q7Z3F1 870 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 ANKRD46Q86W74 232 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 TBC1D3Q8IZP1 549 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 SMPDL3AQ92484 453 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 NELL1Q92832 810 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 GFM2Q969S9 779 aaKnown RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 MIEF2Q96C03 454 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 CENPNQ96H22 339 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 MRGPRX1Q96LB2 322 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 INSM2Q96T92 566 aaPredicted RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 SLC29A1Q99808 456 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 RHBGQ9H310 441 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 VCXQ9H320 206 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 EXO1Q9UQ84 846 aaKnown RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 ERVK-11Q9UQG0 969 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 BTBD3Q9Y2F9 522 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 CFAP20Q9Y6A4 193 aaKnown RBP11.8□□□□□ -0.52
CLIP4-203ENST00000401617 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
CLIP4-203ENST00000401617 ELOVL7A1L3X0 281 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 RFXANKO14593 260 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 YY2O15391 372 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 LYNP07948 512 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 GLULP15104 373 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 RPL10P27635 214 aaKnown RBP11.79□□□□□ -0.52
CLIP4-203ENST00000401617 CCT8P50990 548 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 KIAA1024LP59773 190 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 THEMIS2Q5TEJ8 643 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 TMIGD1Q6UXZ0 262 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 DNAJC14Q6Y2X3 702 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-203ENST00000401617 LPCAT2Q7L5N7 544 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 C17orf64Q86WR6 236 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 MICU2Q8IYU8 434 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 METTL4Q8N3J2 472 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 ZNF740Q8NDX6 193 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 DENND6BQ8NEG7 585 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 OR4K1Q8NGD4 311 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 PPWD1Q96BP3 646 aaKnown RBP11.79□□□□□ -0.52
CLIP4-203ENST00000401617 CXorf40BQ96DE9 158 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 GBP5Q96PP8 586 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 NRTNQ99748 197 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 PITHD1Q9GZP4 211 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-203ENST00000401617 PRO3102Q9H379 93 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 NT5DC2Q9H857 520 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 KCNK12Q9HB15 430 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 ATP6V1HQ9UI12 483 aa11.79□□□□□ -0.52
CLIP4-203ENST00000401617 INVSQ9Y283 1065 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms