RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GRAMD1AQ96CP6 724 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 WDR34Q96EX3 536 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 OR6C1Q96RD1 312 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 NTMT1Q9BV86 223 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 STRADBQ9C0K7 418 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 FGF21Q9NSA1 209 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 ZNF490Q9ULM2 529 aaPredicted RBP15.27■□□□□ 0.04
HMGA1-204ENST00000401473 SATB2Q9UPW6 733 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 RNF11Q9Y3C5 154 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 SCN3AQ9NY46 2000 aa15.27■□□□□ 0.04
HMGA1-204ENST00000401473 IGF2RP11717 2491 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 H3BMH7 237 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 CLGNO14967 610 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 BIRC5O15392 142 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 MSL3P1P0C860 447 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 MLLT3P42568 568 aaPredicted RBP15.27■□□□□ 0.03
HMGA1-204ENST00000401473 ERVPABLB-1P60509 514 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 PPP2R2AP63151 447 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 RELAQ04206 551 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 TRAF3Q13114 568 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 TBCCQ15814 346 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 FRMD7Q6ZUT3 714 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 ERMP1Q7Z2K6 904 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 MCATQ8IVS2 390 aaKnown RBP15.27■□□□□ 0.03
HMGA1-204ENST00000401473 ANKRD53Q8N9V6 530 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 PMEPA1Q969W9 287 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 ZNF501Q96CX3 271 aaPredicted RBP15.27■□□□□ 0.03
HMGA1-204ENST00000401473 SARGQ9BW04 601 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 EHD1Q9H4M9 534 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 PELI2Q9HAT8 420 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 TNFRSF12AQ9NP84 129 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 MED4Q9NPJ6 270 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 ANKMY1Q9P2S6 941 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 LOXL2Q9Y4K0 774 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 ZZEF1O43149 2961 aa15.27■□□□□ 0.03
HMGA1-204ENST00000401473 LOC400499M0QZD8 3231 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 CCDC187A0A096LP49 1063 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 PLD2O14939 933 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 EZRP15311 586 aaKnown RBP15.26■□□□□ 0.03
HMGA1-204ENST00000401473 BCL6P41182 706 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 FOXM1Q08050 763 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 CYP4F3Q08477 520 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 C3orf38Q5JPI3 329 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 HHATQ5VTY9 493 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 ADNP2Q6IQ32 1131 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 LETMD1Q6P1Q0 360 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 RNF44Q7L0R7 432 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 LSMEM2Q8N112 164 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 OR4F6Q8NGB9 312 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 ATP6V1E2Q96A05 226 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 PTCD3Q96EY7 689 aaKnown RBP15.26■□□□□ 0.03
HMGA1-204ENST00000401473 ZFYVE21Q9BQ24 234 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 C20orf27Q9GZN8 174 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 ZNF395Q9H8N7 513 aaPredicted RBP15.26■□□□□ 0.03
HMGA1-204ENST00000401473 NKIRAS1Q9NYS0 192 aa15.26■□□□□ 0.03
HMGA1-204ENST00000401473 CHN1P15882 459 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 PIK3CGP48736 1102 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CCNG1P51959 295 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 MC2RQ01718 297 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 SLBPQ14493 270 aaKnown RBP eCLIP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 HSP90B2PQ58FF3 399 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CFAP157Q5JU67 520 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 PRAMEF17Q5VTA0 474 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 FOXR1Q6PIV2 292 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 L3MBTL4Q8NA19 623 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CTRCQ99895 268 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 MACROD1Q9BQ69 325 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 SHCBP1LQ9BZQ2 653 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 ACTR8Q9H981 624 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 FBXO8Q9NRD0 319 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 TPRP12270 2363 aaKnown RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 FER1L5A0AVI2 2057 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 KCNE1BA0A087WTH5 132 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 H0YGG7 62 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 OR1F1O43749 312 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CLDN9O95484 217 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CHRNGP07510 517 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 NR1D1P20393 614 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 BGNP21810 368 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 ARF3P61204 181 aaPredicted RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 SNRPNP63162 240 aaKnown RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 REEP5Q00765 189 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 LCP2Q13094 533 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 TUBB3Q13509 450 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 NAA25Q14CX7 972 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CHI3L2Q15782 390 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 RBBP7Q16576 425 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CPSF6Q16630 551 aaKnown RBP eCLIP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 ZC3H12BQ5HYM0 836 aaKnown RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 TMTC4Q5T4D3 741 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 LIPJQ5W064 366 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 TMIGD1Q6UXZ0 262 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 VN1R4Q7Z5H5 301 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 MILR1Q7Z6M3 343 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 SYVN1Q86TM6 617 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 MYLK4Q86YV6 388 aaPredicted RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 OR1L3Q8NH93 324 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 WDR36Q8NI36 951 aaKnown RBP15.25■□□□□ 0.03
HMGA1-204ENST00000401473 RNF31Q96EP0 1072 aa15.25■□□□□ 0.03
HMGA1-204ENST00000401473 CNDP1Q96KN2 507 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms