RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TNFRSF14Q92956 283 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 CCDC124Q96CT7 223 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 C12orf66Q96MD2 445 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 GPR87Q9BY21 358 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 PRDM14Q9GZV8 571 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 FBXO34Q9NWN3 711 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 GFOD1Q9NXC2 390 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SHOC2Q9UQ13 582 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SH3D21A4FU49 640 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 PRR23D1E9PI22 279 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 I6L893 689 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 CCL22O00626 93 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 COPEO14579 308 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 NRP1O14786 923 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 NOBOXO60393 691 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 EDF1O60869 148 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 MOCS2O96007 188 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 POMCP01189 267 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 MMP3P08254 477 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 PRR23D2P0DMB1 279 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SMIM10L2AP0DMW4 78 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SMIM10L2BP0DMW5 78 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 CFL1P23528 166 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 OTX2P32243 289 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 AVPR1AP37288 418 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 ANXA11P50995 505 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 ATP5IP56385 69 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 CAV1Q03135 178 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 ZP2Q05996 745 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 ITIH4Q14624 930 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 PLAC9Q5JTB6 97 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 Q5PR19 223 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 DCST1Q5T197 706 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 RTN4RL2Q86UN3 420 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 CDKL3Q8IVW4 592 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 PM20D2Q8IYS1 436 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 CADM3Q8N126 398 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 ASCC1Q8N9N2 400 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 GIMAP7Q8NHV1 300 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 TMEM174Q8WUU8 243 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SPDL1Q96EA4 605 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 MCRS1Q96EZ8 462 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 B3GALT6Q96L58 329 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 NSMCE2Q96MF7 247 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SSX3Q99909 188 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 TSSK1BQ9BXA7 367 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 SLC6A16Q9GZN6 736 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 NMUR2Q9GZQ4 415 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 MANSC1Q9H8J5 431 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 FAM118AQ9NWS6 357 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 LGALS13Q9UHV8 139 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 VPS4AQ9UN37 437 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 FIS1Q9Y3D6 152 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 RAD54BQ9Y620 910 aa6.03□□□□□ -1.44
TRAPPC13-202ENST00000399438 ZNF236Q9UL36 1845 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 TRIP12Q14669 1992 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 ARID2Q68CP9 1835 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 A0A0U1RQS6 177 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 SMIM28A0A1B0GU29 152 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 MBD3L4A6NDZ8 208 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 MBD3L3A6NE82 208 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 TCAF2A6NFQ2 919 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 C19orf67A6NJJ6 358 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 OR2AG2A6NM03 316 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 M0QYT0 321 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 AURKAO14965 403 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 TBX19O60806 448 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 GPR32O75388 356 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 KRT36O76013 467 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 PGLSO95336 258 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 SLC25A27O95847 323 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 SLC16A8O95907 504 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 OR4Q2P0C623 313 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 LCN1P31025 176 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 GJA4P35212 333 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 GLRBP48167 497 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 PGFP49763 221 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 EEF1A1P68104 462 aaKnown RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 EEF1A2Q05639 463 aaKnown RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 LACTB2Q53H82 288 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZNF311Q5JNZ3 666 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 SAPCD1Q5SSQ6 148 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 EEF1A1P5Q5VTE0 462 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 CLEC6AQ6EIG7 209 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 CXCL17Q6UXB2 119 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 ENKURQ8TC29 256 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 TSEN15Q8WW01 171 aaKnown RBP6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 C10orf82Q8WW14 230 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 PGAM5Q96HS1 289 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 RILPQ96NA2 401 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 ADI1Q9BV57 179 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZNF416Q9BWM5 594 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 S1PR5Q9H228 398 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 SNX25Q9H3E2 840 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 ACSS3Q9H6R3 686 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 WDCPQ9H6R7 721 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 WNT16Q9UBV4 365 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 SERGEFQ9UGK8 458 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 MKLN1Q9UL63 735 aa6.02□□□□□ -1.45
TRAPPC13-202ENST00000399438 FZD10Q9ULW2 581 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms